LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops11g00214	ATGGTGGCGGTGCAGATAGCATATGCAGGGGTCAATGTGCTCTATAAGCTCACAGTAAACGATGGCATGAACTTGAGGATTGTTATTGCTTACCGTTTTGTGTTCGCAACTGCTTTCATAGCTCCTCTTGCTCTCATTCTTGAAAGTTTGGAAAAATTAAATTGGCGAACAACAGCAGGGAAGGCCAAGATACTTGGTACATCAACTGGAATTGGTGGAGCAATGATACTGACACTCGTTAAAGGTGTGGAATTCAAGACAGGGTCCCACTTAAACCTTTTGCATCATCAAAACGGTGCGCATCCACATGCCAGACCAGGTGGTAAGACCGTCTTGGGTGCTCTATGCGCTCTTGCCGGTGGCATCTCTTTTGCATTCTGGCTAATTATTCAGGCAAAGTTGAGTAAAAGATACCCAAGTCATTACTCAAGCACTGCGTTGATGTCTTTCTGGGCGTCACTGCTATCCATTCTGTTGGCTCTTTGCTTTGAGAGGGATTTGAGTCAGTGGAGGTTGGGTTGGAATGTTAGGCTTCTAACTGTTGCTTATGCGGGAATAGTGGTTTCTGGAGTAGTGGTGGTTGTGATTTCTTGGTGTATACGCATGAGAGGCCCGTTGTTTGCCTCTGTTTTTAACCCTCTAGTGCTTGTGATTGTGGCCTTGGCTGGTTCTACGATGTTGAACGAGAAACTTTACTTAGGAAGCATCATTGGAGCAGTGTTGATTGTGTGTGGCTTATACGTGGTTTTATGGGGTAAAAGCGAGGAGATGAAGAAGATGATTCCATTAGTGCCATCACAAAGCCCCCTTGAATCCGACACAGTCAAACTAGTTGTAAGGTCTGCCGTAGAAGATAAAAGAAACCACAATAACAACAATACTGTACTAGTGGTGAGGGATAATAAAGATTCATCAGCAGATGGACCTGAAGAGAAAAGTGCACATGTACACAATCAGGGAAAAGAAGGAGGGGAAGGAGAAGAAATTTCTCATCATGCCTAG	1002	0.4441	MVAVQIAYAGVNVLYKLTVNDGMNLRIVIAYRFVFATAFIAPLALILESLEKLNWRTTAGKAKILGTSTGIGGAMILTLVKGVEFKTGSHLNLLHHQNGAHPHARPGGKTVLGALCALAGGISFAFWLIIQAKLSKRYPSHYSSTALMSFWASLLSILLALCFERDLSQWRLGWNVRLLTVAYAGIVVSGVVVVVISWCIRMRGPLFASVFNPLVLVIVALAGSTMLNEKLYLGSIIGAVLIVCGLYVVLWGKSEEMKKMIPLVPSQSPLESDTVKLVVRSAVEDKRNHNNNNTVLVVRDNKDSSADGPEEKSAHVHNQGKEGGEGEEISHHA*	334

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops11g00214	333	Pfam	EamA-like transporter family	112	250	IPR000620	GO:0016020
	Rops11g00214	333	MobiDBLite	consensus disorder prediction	303	333	-	-
	Rops11g00214	333	PANTHER	WAT1-RELATED PROTEIN	1	45	IPR030184	GO:0016020\|GO:0022857
	Rops11g00214	333	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	152	254	-	-
	Rops11g00214	333	MobiDBLite	consensus disorder prediction	290	333	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops11g00214	Rops-Chr11	2901302	2905355	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops11g00214	1	261	Nodulin-like Gene Family	AT1G68170	38.509	3.51e-67	213

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops11g00214	-		-	gmx:100787839	353.599