Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00213 ATGTGGAACGTAGTGCATGTATTGAAGCCAGTGCTGCTAATGGTGTTGGTGCAGATTGCTAATGCTTGGGTCAATGTTCTTTACAAGCTCGCGATGAACGATGGCATGAACTTCAGGGTGATTGTGGCCTACCGCTATATTTTCGCTACTGCTTTCATAGCTCCACTTGCTCTCCTTATTGAAAGGTTGGAAAGATTAAATTTAAGAACAGCATCAGGGAAAGCCAAGATAATTGGGACAATGATTGGGATTGGTGGAGCAATGGTATTGACTTTCCTAAAAGGCATCGAAATTAAGATGCTGTCTTTCCACATAAACCTTTTCAATCACCAAAACGGCCACATCGTAAACCCACATGCTAGCTCTGGTGTTATAAGCATCTTTGGTGCTGTCTGCTGTGTCGCCAGCAACGTCTGTTATTCTTTATGGCTTATCGTTCAGGCAAAGATGAGTGAAAGATACCCAAGTCCTTATTCTAGCACTGCATTGATGTCTCTAATGGGTGCACTGTTATCCATTATGTTTGCTTTTTGCCTTGAGTGGGATTTGAGTCAGTGGAGGCTTGGTTGGAATGTTAGGCTACTAACTGTAGCTTATGCGGGTATGGTGGTTTCTGGAGTGATGGTAACGGTGATTTCGTGGTGCGTACGCTTGAGGGGCCCATTGTTTGTCTCCAGTTTTATGCCTCTAATGCTTGTGGTTGTGGCCTTTGCTGGATCCACAATTTTGGACGAGAAGCTTTACCTTGGAAGTGTCATTGGATCGGTGTTGATTATTTGTGGATTATACGTGGTTCTATGGGGAAAAAGTAAAGAGATGACTAAAGGTCAATTGGTGCCATCAGAAAGCACCCATAAATCCGACACCGTCGAAATAATGGTCAAGTCTCCAGCAGAAGATAAAAGCAAGAACAATACCCCCGATAATGCTGCAAATGCAGTTGGGGCTGATGAAGATTCATCGGAACATGGATGTGAAAGTGATAAGGCGGTGGAAGGAGAAGAGGGTGGAAAAAATGACATTGACAATAATGTTCAATGTGAAGTTGTTGCTGTGTCGATGTTGTTCTTATTCCATGGTTGTTTCCTACGTGGAAGAGAAGGAAATGAGGTCACCCATAGTTATGAAGGTTGGCTGCGATGTGTGAAAAAGAGGCTTAAGAATGAAAGAGAGGCCCTCTTGAAGAGTAATGTTGAACTCAAAACTGCGACGGCACAGGCAAAAGAGTTGGAAGTTAATCTCATCTCCCTACGAGAATCGCGAAGACTGGATGATGAGAAAATCAAGAAACTGTCCAGTGATAAGGTAGGCCTTGTTGATCAGCACAATAAGGAAAGGGAATCGTGGAAGTAA 1353 0.4339 MWNVVHVLKPVLLMVLVQIANAWVNVLYKLAMNDGMNFRVIVAYRYIFATAFIAPLALLIERLERLNLRTASGKAKIIGTMIGIGGAMVLTFLKGIEIKMLSFHINLFNHQNGHIVNPHASSGVISIFGAVCCVASNVCYSLWLIVQAKMSERYPSPYSSTALMSLMGALLSIMFAFCLEWDLSQWRLGWNVRLLTVAYAGMVVSGVMVTVISWCVRLRGPLFVSSFMPLMLVVVAFAGSTILDEKLYLGSVIGSVLIICGLYVVLWGKSKEMTKGQLVPSESTHKSDTVEIMVKSPAEDKSKNNTPDNAANAVGADEDSSEHGCESDKAVEGEEGGKNDIDNNVQCEVVAVSMLFLFHGCFLRGREGNEVTHSYEGWLRCVKKRLKNEREALLKSNVELKTATAQAKELEVNLISLRESRRLDDEKIKKLSSDKVGLVDQHNKERESWK* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00213 450 MobiDBLite consensus disorder prediction 319 338 - -
Rops11g00213 450 PANTHER WAT1-RELATED PROTEIN 9 58 IPR030184 GO:0016020|GO:0022857
Rops11g00213 450 Pfam EamA-like transporter family 128 266 IPR000620 GO:0016020
Rops11g00213 450 SUPERFAMILY Multidrug resistance efflux transporter EmrE 170 270 - -
Rops11g00213 450 Coils Coil 383 420 - -
Rops11g00213 450 MobiDBLite consensus disorder prediction 295 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00213 Rops-Chr11 2880704 2888387 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00213 8 312 Nodulin-like Gene Family AT1G68170 37.808 3.99e-76 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00213 - - gmx:100788378 407.142