Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00211 ATGAAGGGTATAGGGAATTTACTGCATGGGTTGAAACCTGTTATGCTGATGGTGTTGGTGCAGATTGCATACGCTGCAGTCAGTGTACTGTATAAGTTCGCCATAAACGATGGAATGAGTGTAAGGGTAGCTACTGCCTATCGCCTTGCTTTTGGATCTGCTTTCACCATTCCTCTTGCTCTCATTTCTGAAAGAAAGAAGAGACCAAAGCTGACATGGAGGGTGCTTTTCATGGGATTTCTTTGTGGTTTGTTTGGGGGGAGTTTATTTCAAAACCTTTTCTATGAGGCCCTGGCTATAACATCAGCAACGTTTGTGACTGCCATCTACAACCTCATTCCAGCCATCACGTTTGTCTTGGCAATCTCCTGCGGTTTCGAAAGATTAAATTTGAGGGCAGCAGCAGGAAAGGCTAAGGTGTTAGGAACTCTAACTGGAATCTGTGGAGCAATGTTATTGACCTTTCTCAAAGGGGTAGAAATCCATATTTGGCCCTTTCACCTTAACCTTTTGCATCCACATCAGCACCAAAACAGCCACGTGGGTAGTCATTGGTTGGGGGTTCTCTATGCTATAGCAAGCTGCTTCTCATTTGCCTCATGGCTCATTATTCAGGCTAAGATGAGCAAAGAATACCCAAGCCATTATTCAGGCACAGCTTTGATGTCCACAACTGGAGCCATTCAAGCCACTCTTTTTGGTTTTTGTGTTGAGAGGGACTGGAGCCAATGGAAGCTGGGTTGGAATATCAGGCTACTAACCGTGGCTTATTCGGGAATCGTGGCTTCTGGATTAGTGGTTATTGTCACTGCATGGTGCATACAAATGAGAGGGCCTCTATTTGCGTCTGTTTTCAACCCTCTAATGCTCGTGCTTGTGGCTGTTGCTTCTTCTTTGATGTTGGATGAGAAGTTATATTTAGGAAGTTTGCTTGGAGCAGTGCTGATTGTGAGTGGCCTCTACATGGTTCTGTGGGGTAAGAGTAAAGAGATGAAAAAGATCACTCAGTTAGTGCCATCAGAAATCACCCAAGAAGAGAAAGATATAGAAGCTGTTGTTATGTCCACACCAGTAGATGATGATAAATGTGACCACAACAATCACAGCCAAATCAGCAATACCAGTAATGTTGACAAAGATTATGACAATTTGCCAAGAAATGTGGAAGATAATATTCACATATAG 1185 0.4338 MKGIGNLLHGLKPVMLMVLVQIAYAAVSVLYKFAINDGMSVRVATAYRLAFGSAFTIPLALISERKKRPKLTWRVLFMGFLCGLFGGSLFQNLFYEALAITSATFVTAIYNLIPAITFVLAISCGFERLNLRAAAGKAKVLGTLTGICGAMLLTFLKGVEIHIWPFHLNLLHPHQHQNSHVGSHWLGVLYAIASCFSFASWLIIQAKMSKEYPSHYSGTALMSTTGAIQATLFGFCVERDWSQWKLGWNIRLLTVAYSGIVASGLVVIVTAWCIQMRGPLFASVFNPLMLVLVAVASSLMLDEKLYLGSLLGAVLIVSGLYMVLWGKSKEMKKITQLVPSEITQEEKDIEAVVMSTPVDDDKCDHNNHSQISNTSNVDKDYDNLPRNVEDNIHI* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00211 394 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020
Rops11g00211 394 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020
Rops11g00211 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 329 - -
Rops11g00211 394 PANTHER WAT1-RELATED PROTEIN 12 340 IPR030184 GO:0016020|GO:0022857
Rops11g00211 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 153 - -
Rops11g00211 394 MobiDBLite consensus disorder prediction 363 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00211 Rops-Chr11 2842181 2844152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00211 11 380 Nodulin-like Gene Family AT1G25270 41.287 2.28e-97 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00211 - - gmx:100809587 582.793