Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00206 ATGGGTGGGAAGATAAACTTGGAGATATTAAGCAGGAAATGCATCAAACCCTCCACACCCACACCTCCACGCTTCAAAAACTTCAATCTCTCTCTACTAGACCAGCTTTCCCCTAACATCCATGGCAACATGACCCTCTTCTACCCTCACAACAACAACAACCATTCATCATCTGATTCTGATTCCCAATTCTCCACCAAATCCCAACTCCTTCAAAACTCACTCTCCCAAACGTTGACCCTTTTCTACCCTCTCGCCGGACGCCTCCAAGATGCCACCACCATTGATTGCAACGACCAAGGAGCCTTCTTCATCGAAGCTAGAACAACAACCACTTTCTCCGACATCCTCACCAACCCTGATTTCGACACCCTCGAATGTCTCATCCCCACAACTGACAAAGAAACCATGCAAATCTCAAACGGTTCCATGCTCCTTGTCCGTTTCACCTTGTTCGGTTGCGGTGGCACCGCCGTTAGCATTTCACTCACCCACAAGATTGCCGACATAGCTGCCTTGATCACTCTCCTCAAAACCTGGACCGCCGAGTGCGGCGGAGTCACCGAACCGGTGGTCCCTCAACTGGCCACCGGTGTCACTCTCTTTCCTCCGAAAGAGATTCTCGGCATGTCCGCTTCCATAAACACCACCGCCGGGAAGTTCACTTCTAGAAGGTTCGTTTTCGACGCGTCCAAGGTTGGAGAACTCAAAAGCAGAATTAAAAGTTTCCACCCGTCAAGGGTGGAGGTGGTGCTTGCTCTCATTTGGAGATGTGCTTTGTTAACTTCTCGTTCCAAAACGGAATCGTTTAGGCCTTCGGCTTTGTTCCAAGCCGTGAACCTCCGTCCCAGGATGGACCCGGCGGTTCCCGACACCGCCGTCGGGAACTTTGTGTGGCCGTTCGCGGTGGCAGTGGAGGAGGAGTGCCACGTAGAGTTTGACGAGTTGGTGACGAGGATGAGGAAGGGCATGAGGGAGTTTCTTGACACCAAGGTAGAGAAGTTCAAAGAGGAAGGTGCATTTGGTGTGGTTATGGAGAGTCTCAAGGAAAGGGCTCAACTTTTGAGCAAGAACAGTGACACTGTGGTTTATAAATGTTCGAGTTGGTGTAAGTTTCCATTCTATGAAGTTGATTTTGGGTGGGGGAAGCCTGTGTGGATGTGTAGTGTGAATAAGCTGGTGAGTAATACCATTGCCTTGATGGATACAAAGGATGGTGGAGTTGAAGCTTTTGTGACTCTGGATGAGGAGGACATGGGCTTGTTTGAACAACATGAGGAGCTGTCACATTATGCTGTGCTTGGATTTCCCTGTCTTCGAGAGGCAGAGGATAAAGTACGGAATAATAGTTATTCATCGAAAAATTAA 1368 0.492 MGGKINLEILSRKCIKPSTPTPPRFKNFNLSLLDQLSPNIHGNMTLFYPHNNNNHSSSDSDSQFSTKSQLLQNSLSQTLTLFYPLAGRLQDATTIDCNDQGAFFIEARTTTTFSDILTNPDFDTLECLIPTTDKETMQISNGSMLLVRFTLFGCGGTAVSISLTHKIADIAALITLLKTWTAECGGVTEPVVPQLATGVTLFPPKEILGMSASINTTAGKFTSRRFVFDASKVGELKSRIKSFHPSRVEVVLALIWRCALLTSRSKTESFRPSALFQAVNLRPRMDPAVPDTAVGNFVWPFAVAVEEECHVEFDELVTRMRKGMREFLDTKVEKFKEEGAFGVVMESLKERAQLLSKNSDTVVYKCSSWCKFPFYEVDFGWGKPVWMCSVNKLVSNTIALMDTKDGGVEAFVTLDEEDMGLFEQHEELSHYAVLGFPCLREAEDKVRNNSYSSKN* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00206 455 Gene3D - 4 210 IPR023213 -
Rops11g00206 455 Pfam Transferase family 6 428 - -
Rops11g00206 455 PANTHER F21J9.9 8 425 - -
Rops11g00206 455 Gene3D - 219 431 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00206 Rops-Chr11 2779979 2781346 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00206 5 424 Monolignol Biosynthesis Gene Families AT5G48930 24.449 1.13e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00206 - - pcin:129311859 595.504