Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00205 ATGCAAGAACCTCCACAAACGGTTGCCGAGGGCACCGGTGGAGAAAAGGGAAAGGGGAGGGTTGTAGAGGAACCCCTTGATGAGGCCACTCTTCAAAAGCAAAAAAGAATGATCAAGAACAGAGAGTGTGCCGTTAAATGCAGGAAACACAAGAAGATTTACAAAGCTGAGCTTGAAGCTTGGGTTAAACGTCTTGAGGAAGAGAATGCACGATTGTTGAAAGAAAAGGAGGAGCCTGACATGGATGCTATATTTGAGGAGGCTAATAAGAGAGAGGGAGAGTTGCCAGTCACACAGGCAAAGCTGGAGCAGCAGATGGGGTGCGTCATTCCAGTAGTGGAAAAGCGTAAACCAAGACGAATGCTTCGGAAAGTGAATTCAACCGAATGGTTATAG 396 0.4672 MQEPPQTVAEGTGGEKGKGRVVEEPLDEATLQKQKRMIKNRECAVKCRKHKKIYKAELEAWVKRLEEENARLLKEKEEPDMDAIFEEANKREGELPVTQAKLEQQMGCVIPVVEKRKPRRMLRKVNSTEWL* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00205 131 SMART brlzneu 28 108 IPR004827 GO:0003700|GO:0006355
Rops11g00205 131 Gene3D - 31 81 - -
Rops11g00205 131 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 30 78 IPR004827 GO:0003700|GO:0006355
Rops11g00205 131 Coils Coil 51 78 - -
Rops11g00205 131 MobiDBLite consensus disorder prediction 1 23 - -
Rops11g00205 131 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 13 103 IPR043452 GO:0003700|GO:0045893
Rops11g00205 131 Pfam bZIP transcription factor 28 77 IPR004827 GO:0003700|GO:0006355
Rops11g00205 131 SUPERFAMILY Leucine zipper domain 33 76 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00205 Rops-Chr11 2774920 2776537 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00205 13 130 bZIP Transcription Factor Family AT5G44080 45.455 7.39e-21 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops11g00205 bZIP_1 4.2e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00205 K14432 - rcu:8283158 103.605