Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00204 ATGGCGTCGTGGCCACCACCATGGAATACCTGGTCTCTTGATACTGACGAGATATGGAAGAACATGGAACTCGATGGTTTCTTTCCCCAAGACACCACCATGCAAGAACCTCCTCAAACGGTTTCCAATGAGATTGTGGCTGAACCACAAAACATGACACTCGGAAGTTTCTTCCCCCAAGACACCACCATGCAAGAACCGCCTCAAAAGGTTGCGGAGGGCACCAGTGGAGGAAAGGGAAAGGGAAAGAGGACGGTTGTCGAGGAACAACTTGATGAGGCCACTCTTAAAAAGCAGAGAAGAATGATCAAGAACAGAGAGTCTGCAGCTAGGTCCAGGGAACGCAAACAGGCTTTCGTAGCCGAGCTTGAATCTTCGGTTGCACATCTTGAGGAAGAGAATGCACAGTTGTTGAGGGAACAGGCTGATAGGGAAAAGCAGAGGTATAAGCAGCTGATGGAGTCCATCATTCCAGTGGAGGAGAAGCCTAAACAAAGAAAACAGTTTGGGAGACAGAAATCATTTTGA 528 0.483 MASWPPPWNTWSLDTDEIWKNMELDGFFPQDTTMQEPPQTVSNEIVAEPQNMTLGSFFPQDTTMQEPPQKVAEGTSGGKGKGKRTVVEEQLDEATLKKQRRMIKNRESAARSRERKQAFVAELESSVAHLEEENAQLLREQADREKQRYKQLMESIIPVEEKPKQRKQFGRQKSF* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00204 175 Coils Coil 113 155 - -
Rops11g00204 175 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 100 115 IPR004827 GO:0003700|GO:0006355
Rops11g00204 175 PRINTS cAMP response element binding (CREB) protein signature 130 147 - -
Rops11g00204 175 PRINTS cAMP response element binding (CREB) protein signature 92 108 - -
Rops11g00204 175 PRINTS cAMP response element binding (CREB) protein signature 110 130 - -
Rops11g00204 175 MobiDBLite consensus disorder prediction 54 70 - -
Rops11g00204 175 SMART brlzneu 93 155 IPR004827 GO:0003700|GO:0006355
Rops11g00204 175 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 96 157 - -
Rops11g00204 175 CDD bZIP_plant_BZIP46 97 141 - -
Rops11g00204 175 Pfam bZIP transcription factor 93 152 IPR004827 GO:0003700|GO:0006355
Rops11g00204 175 SUPERFAMILY Leucine zipper domain 96 148 IPR046347 GO:0003700|GO:0006355
Rops11g00204 175 Gene3D - 96 154 - -
Rops11g00204 175 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 95 147 IPR004827 GO:0003700|GO:0006355
Rops11g00204 175 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 56 150 IPR043452 GO:0003700|GO:0045893
Rops11g00204 175 MobiDBLite consensus disorder prediction 54 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00204 Rops-Chr11 2760171 2761891 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00204 69 164 bZIP Transcription Factor Family AT1G03970 57.732 5.72e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops11g00204 bZIP_1 2.1e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00204 K14432 - twl:119982647 123.635