Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00202 ATGGCGTCGTGGAATAAGGATCTGCCACGACAGTGGTCTCTTAATACTGAAGAGATATGGAAGAACATGGAACTCGAAGGTTTCTTTCCCGAAGACACCACCCTGCAAGAACCACCTCCTCAAACGTTTTCCAATGAGATTGTGGCTGGCAGTGACACTGAACCACAAAACATGACACTCGAAGGTTTCTTGACCAAAGACACCACCATGCAAGAACCGCCTCAAACGGTTGCGGAGGGCACCAGTGGAGGAAAGGGAAAGGGGAGGGTTAAGGAGGAACCCCTTGATGAGGCCACTCTTAAGAAGCAAAGAACCATGATCAAGAACAGACAGTCTGCTGCTAAGTCCAGGGAACGCAAACAGGCTTACATAGCTCAGCTTAAATCTTGGGTTACATATCTTAAGGAAGAGAATGCACGATTGTCGAGGGAAAAGGCTGATATGGAAATGCAGAGGCTTAACCGGGAGATGATTGAGATACAAAATTTGGATGCTATATTTGCGGAGGCTGATATGAAAGAGGCAGAGCAGCCAGTCACCAAAGTACAGCTGGAGAAGGTATATTCAGATATCAAAACTTTGGTCCGGCAAGAGGTTGAGAATGTGCGAAGAGATATTGGCCGGGTCGAGACCAAGATTGATGCAGATATTGGCCGGGTCGAGACCAAGATTAATGCTCTCCTGATTCAACTGGAGGCAGACAGTGTTAAAGGGATCACTCTGAATTGTAATGTTGTCTAG 741 0.4683 MASWNKDLPRQWSLNTEEIWKNMELEGFFPEDTTLQEPPPQTFSNEIVAGSDTEPQNMTLEGFLTKDTTMQEPPQTVAEGTSGGKGKGRVKEEPLDEATLKKQRTMIKNRQSAAKSRERKQAYIAQLKSWVTYLKEENARLSREKADMEMQRLNREMIEIQNLDAIFAEADMKEAEQPVTKVQLEKVYSDIKTLVRQEVENVRRDIGRVETKIDADIGRVETKINALLIQLEADSVKGITLNCNVV* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00202 246 Gene3D - 100 163 - -
Rops11g00202 246 SMART brlzneu 97 163 IPR004827 GO:0003700|GO:0006355
Rops11g00202 246 MobiDBLite consensus disorder prediction 29 55 - -
Rops11g00202 246 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 99 151 IPR004827 GO:0003700|GO:0006355
Rops11g00202 246 SUPERFAMILY Leucine zipper domain 100 149 IPR046347 GO:0003700|GO:0006355
Rops11g00202 246 CDD bZIP_plant_BZIP46 101 148 - -
Rops11g00202 246 MobiDBLite consensus disorder prediction 35 55 - -
Rops11g00202 246 Pfam bZIP transcription factor 97 145 IPR004827 GO:0003700|GO:0006355
Rops11g00202 246 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 104 119 IPR004827 GO:0003700|GO:0006355
Rops11g00202 246 MobiDBLite consensus disorder prediction 69 92 - -
Rops11g00202 246 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 15 152 IPR043452 GO:0003700|GO:0045893
Rops11g00202 246 Coils Coil 131 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00202 Rops-Chr11 2698532 2700129 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00202 83 157 bZIP Transcription Factor Family AT5G44080 51.316 1.08e-14 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops11g00202 bZIP_1 1.2e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00202 K14432 - zju:107421564 96.2857