Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00201 ATGGCGTCGTCGAATCGGGATCTGCCACGACAGTGGTCTCTTTCTACAGAAGAGATGTGGAAGGAGATTGTGGCTGACACTGAATCTCAAAAGACGACACTTGAAGAAGATTTCTTGACCAAAGACACCACCAACATGATCTTACCTCCTCAAATGGTTCCCAGTGCCACCAAAGGAGGAAGGGGAAAGAAAAGGGTTGTGGAGGAACAACCCCTTGATAAGGCCACTCTTCAAAAGCAAAGAAGAATGATCAAGAACAGAGAGTCTGCAGCTAGGTCCAGGGAACGCAAACAGGCTTACACAGTTGAGCTTGAATCTTTGGTTACACATCTTGAGGAAGAGAATGCACGATTGTTGAGGGAAGAGGCTGATATGAAAAAGCAGAGGTTTAACCAGCTCATGAAGTGCCTCATTCCAGTGGTGGAGAAGCGTAAACCAAGACAAAAGCTTCGGAGAGTGAATTCAGCCCAATGGTGA 477 0.4654 MASSNRDLPRQWSLSTEEMWKEIVADTESQKTTLEEDFLTKDTTNMILPPQMVPSATKGGRGKKRVVEEQPLDKATLQKQRRMIKNRESAARSRERKQAYTVELESLVTHLEEENARLLREEADMKKQRFNQLMKCLIPVVEKRKPRQKLRRVNSAQW* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00201 158 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 128 IPR004827 GO:0003700|GO:0006355
Rops11g00201 158 MobiDBLite consensus disorder prediction 42 71 - -
Rops11g00201 158 CDD bZIP_plant_BZIP46 78 127 - -
Rops11g00201 158 SUPERFAMILY Leucine zipper domain 78 129 IPR046347 GO:0003700|GO:0006355
Rops11g00201 158 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Rops11g00201 158 Pfam bZIP transcription factor 75 129 IPR004827 GO:0003700|GO:0006355
Rops11g00201 158 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 15 158 IPR043452 GO:0003700|GO:0045893
Rops11g00201 158 SMART brlzneu 74 138 IPR004827 GO:0003700|GO:0006355
Rops11g00201 158 Coils Coil 101 128 - -
Rops11g00201 158 Gene3D - 77 133 - -
Rops11g00201 158 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 77 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00201 Rops-Chr11 2693500 2695578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00201 59 158 bZIP Transcription Factor Family AT5G44080 60.784 6.07e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Rops11g00201 bZIP_1 3.1e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00201 K14432 - gmx:100101878 163.696