Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00194 ATGGAGGGTGAGCGGAAGCAATTGAAGCCACGGCGGCTTGAGCGGCGGAACGCCATGAAGAACATCGATTACAAAGTGGAAGATGTGTATTCAGCTTGTTTGGAGAACCAAAGCAGTTTGCGTGTGAAGGGAATAGATGGGGAATTCGAGCTTATATTTCATAGCCTGGGCTTCTCAGGACCAGAGGACTTTGCCATCCCAACTGCAGCTTGGGAACAAGCCCAAAAGGCTCGCTTTGCTTCTCCTCCAAACAACACAAAACTTGAAGAAACTAAGGTGGGCCTTGATTCTTCAAATGATAATAGAGATGGAGGGATCAAGGGTGTTAGGCCTCCCGTTCTGGCACCGCCGCCGGCGATGTTGGGGCAGCTTGTTGTTGTTGACCAGGTCAGCTCTAGTTGGGATTTGATGAGGTCCCTTGCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCCCATGATGATGATGATGAAGATGAAGATGTTGATTCCCCAACTTCAGGGGAAGAAGATGAGGAAGTGTCCCGTGACCATGACCATGAGGTCTTTGACATCGTCAATGATATTGGAAAAATTGAGAAGGCTTCTTCTGATATGGTTGACGAGTCCATTCATGATGTGTCCCCAAATGGGTCCTTTAAGCGTACTTTCTTCTCGTGGCAAAAAGGCGAGATTTTAGGCAAGGGCTCCTTTGGAACTGTCTATGAAGGCTTCACTGATGATGGGATATTTTTTGCAGTAAAGGAAGTGTCTTTGCTGGATGATGGAAGCCAGGGAAAACAAAGCATTTTCCAACTTCAGCAGGAAATATCTCTTTTGAGCCAGTTCCAACACGAGAACATAGTTCGATATCTTGGCACAGACAAGGACAATGATAAGCTTTATATATTCCTTGAGCTTGTAACAAAAGGATCCTTGGCAAGTCTCTATCAAAAGTATCGTTTAAGAGATTCTCAAGTTTCTGCTTACACCAGGAAGATTTTAAGTGGCTTGAAGTATCTTCATGATCGTAATGTGGTTCACAGGGACATCAAGTGTGCCAATATATTGGTTGATGCAAATGGGTCCGTCAAACTTGCAGATTTTGGGTTGGCAAAGGCAACCAAATTGAATGATGTTAAATCAAGCAAAGGCTCCCCGTACTGGATGGCACCTGAGGTTGTGAACTTAAGGAACCGTGGTTATGGACTAGCAGCTGATATATGGAGCTTGGGATGTACAGTTTTAGAGATGTTGACACGGCAACCTCCTTACTCTCATTTGGAAGGGATGCAAGCGTTATTTCGGATTGGCAGGGGTCAACCTCCATCTGTTCCCGAATCTTTATCAAAAGATGCCAGAGATTTCATTCTTAAATGCTTACAAGTTAACCCAAATAACCGACCAGCTGCTGCTCAGCTATTGGATCATCCATTTGTAAAGAGACCACTTCTGTCTCCCATAAGTCCTGTTTCTCCACGTATTAATCTTTTGCTGTCTTAA 1479 0.4469 MEGERKQLKPRRLERRNAMKNIDYKVEDVYSACLENQSSLRVKGIDGEFELIFHSLGFSGPEDFAIPTAAWEQAQKARFASPPNNTKLEETKVGLDSSNDNRDGGIKGVRPPVLAPPPAMLGQLVVVDQVSSSWDLMRSLAPSPSPSPSPSHDDDDEDEDVDSPTSGEEDEEVSRDHDHEVFDIVNDIGKIEKASSDMVDESIHDVSPNGSFKRTFFSWQKGEILGKGSFGTVYEGFTDDGIFFAVKEVSLLDDGSQGKQSIFQLQQEISLLSQFQHENIVRYLGTDKDNDKLYIFLELVTKGSLASLYQKYRLRDSQVSAYTRKILSGLKYLHDRNVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSSKGSPYWMAPEVVNLRNRGYGLAADIWSLGCTVLEMLTRQPPYSHLEGMQALFRIGRGQPPSVPESLSKDARDFILKCLQVNPNNRPAAAQLLDHPFVKRPLLSPISPVSPRINLLLS* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00194 492 ProSitePatterns Protein kinases ATP-binding region signature. 225 247 IPR017441 GO:0005524
Rops11g00194 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 338 350 IPR008271 GO:0004672|GO:0006468
Rops11g00194 492 MobiDBLite consensus disorder prediction 78 92 - -
Rops11g00194 492 SMART serkin_6 219 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00194 492 SUPERFAMILY Protein kinase-like (PK-like) 219 483 IPR011009 -
Rops11g00194 492 Pfam Protein kinase domain 220 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00194 492 MobiDBLite consensus disorder prediction 152 167 - -
Rops11g00194 492 Gene3D Transferase(Phosphotransferase) domain 1 218 483 - -
Rops11g00194 492 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 112 476 - -
Rops11g00194 492 MobiDBLite consensus disorder prediction 137 179 - -
Rops11g00194 492 ProSiteProfiles Protein kinase domain profile. 219 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00194 492 MobiDBLite consensus disorder prediction 77 114 - -
Rops11g00194 492 FunFam Mitogen-activated protein kinase 1, putative, expressed 217 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00194 Rops-Chr11 2634172 2640347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00194 3 76 MAP Kinase Kinase Kinase AT4G08500 40.217 3.85e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Rops11g00194 Pkinase 1.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00194 K13414 - gmx:100806902 640.958