Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00177 ATGGGGAAAAATGAAGAGCAATATGTGGATGAAGAAGGGCAGAGGCAGAACGATGGGGAAGAGGGTCCTTCGTGTTGTTCGGTGGTTCTTCTGGGAGCTTTCAGTTTCAAGTGCTTTTTCATTTTATTGTTCAGTTTAGCGGCTTTGCTTTCTGGAATCTTCTGGATTCTTCCTAGATACACAGTCAAGTATAGTTTTGATGCAAAAGATGTAATTAAGCAAAGTGCTACTGTTCAGGCATCCTTCAGACTGGAAAAACCAGTTTCACAACTTATTCCATACATTGAAAGATTAGAGTATGATATATATGGTGAAATAGCTCTGCCAAGTACAAAGGTGGCAATCCTCTCCATGCACCAAAGTATTACACCTAACTGGACTGATGTGGTGTTTGGTGTTCTCTCTGATCCAATGAACTTTTCAATAAATCCAGCTTCCTTGAGTGTGCTGAGGTCAACATTTATTGAACTGTTCCTCCAGCAATACAACCTGACTTTGACAACATCAATATTTGGGAATGCATCTAAATTTGAGATCTTGAAGTTTCATGGGGGGGTAACTGTAATACCAGTGCAGTCTCCTTCTATTTGGCCAGTACCCCAGAATCTGTTTAATTTCACTCTTAATAATTCAATTTCTGAAGTACTGGATAATTTCGATGACTTCAAGGATGAATTGAAGTTTGGACTGCATCTGAAGTATGATGAGAACGTGTATGTGCAAATAACAAGTGCAAATGGCTCAACGCTAGCTCCTCCAGTAGTAGTGCAGGCTTCAATCATTCCAGGCTTTGGGAGCCTTTTGCCCCAAAGATTGAAACAATTAGCTAAAACAATAAGAGGCTCTGCTGGAAAAAATCTTGGCCTCAATAATATAGTTTTTGGCAAAGTCAAAGAAATCAGATTATCATCTTTCTTAGAGGATACGCTGCATGCTTACCCACCCTCTCCTGCTCCTGCTCCATCCCCACAGTTAACTGATCACTCTGAACCATCAATTTCAGCATACCATGCGCCTTCTTACTCTCCAATATCCCCACCAACTGCTGAGAAACCTCCTTGTTTTGACTGTGAAGTATCCTCACCTGCACCTTCTATTGTGACTGAGCATCCTCCAGATCCCTGTCCATACAGTGGCTCCATACATCATCAAATCCCTTCACCAAAATCTTATTCTAAACCATCCTTCCTCCCGGCTCATTCACCTGCTGCTGCCCCTACCTCACTTTCTGCTGGCCACACAACTGAGGTAGCTCCAGATCTGTCACATGGATCCAAGCTTCGCCAGGATGAAGGGAGATCTAAAAAATTGGTGTCTCAGTTACTTGCTCCATCCTCTCTTTCTTCAGCAGGTGGTGATTTCCATAGGGAAATCTCGCTAATGGGATTTTGTATGCTCTTGATTTCTTTTGTTTTTCTCAATGATATTACATTTTGA 1437 0.4182 MGKNEEQYVDEEGQRQNDGEEGPSCCSVVLLGAFSFKCFFILLFSLAALLSGIFWILPRYTVKYSFDAKDVIKQSATVQASFRLEKPVSQLIPYIERLEYDIYGEIALPSTKVAILSMHQSITPNWTDVVFGVLSDPMNFSINPASLSVLRSTFIELFLQQYNLTLTTSIFGNASKFEILKFHGGVTVIPVQSPSIWPVPQNLFNFTLNNSISEVLDNFDDFKDELKFGLHLKYDENVYVQITSANGSTLAPPVVVQASIIPGFGSLLPQRLKQLAKTIRGSAGKNLGLNNIVFGKVKEIRLSSFLEDTLHAYPPSPAPAPSPQLTDHSEPSISAYHAPSYSPISPPTAEKPPCFDCEVSSPAPSIVTEHPPDPCPYSGSIHHQIPSPKSYSKPSFLPAHSPAAAPTSLSAGHTTEVAPDLSHGSKLRQDEGRSKKLVSQLLAPSSLSSAGGDFHREISLMGFCMLLISFVFLNDITF* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00177 478 MobiDBLite consensus disorder prediction 1 18 - -
Rops11g00177 478 PANTHER F20B24.21 1 451 - -
Rops11g00177 478 MobiDBLite consensus disorder prediction 363 433 - -
Rops11g00177 478 MobiDBLite consensus disorder prediction 1 22 - -
Rops11g00177 478 MobiDBLite consensus disorder prediction 313 347 - -
Rops11g00177 478 MobiDBLite consensus disorder prediction 325 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00177 Rops-Chr11 2360196 2365512 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00177 1 308 C3H Transcription Factor Family AT3G10810 39.936 4.05e-51 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00177 - - ccaj:109803451 694.501