Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00159 ATGGCAAGAAGAAACCGTGGCAGAAGGTCACTGCAAGAAACCCTTCGTCGTCGAGTTGAGTCCTGCAAATCCAGATACTCCACCACCGATGAAATTGTTAACCATCTTCGCTCAACGTACCCTGATTACAAGTTAACCAAGCTAAAAACCCTAACTCGATTTGTTCGTGAAGCTAATGACAATGACGATGACGATGACGATGAGGGTCGAAGCGGGTCTCTAAAGAAACAGAAGAAAACTGATGTAGCTGAAGAGAGATTGCAAAAGATGGAAGCTTTACATCTCAGTAGACGGATGCAGAGCAATCAGACTCCATCTACCTCCTCTGATTCATCTTCGGAGAGCGACGAAGAAGATGGGTCTACGTCTGTGTCGACATCGGAGGATGCAATTTATGGGCAGAAAGTTGAACCTGCTTTTGACTTGATGAAAACAATGCTTCGGAACTCGTATGCTGGTACGAAGGTTGTGGCAGAGGAGAAGAACGTTGAATTGGAGGTTGCCAATAGTAGCAAGGCCACTCTGACTGTGAACAATGAAGGTGGTGGTGGAGGAGAAAGTGAAGGTGAAGCCAAGTCAGCGAGGAAGCTATCGAAGGGTTCAGTCTCATATGGTGGTGGTGGTGGTGAAGTGAAGGGGAATGAGGGTCCTAGGTTTAGGGATTTGGGTGGGATGAAGGAGGTTTTGGAGGAACTGAAGATGGAAGTGATTGTGCCATTGTACCATCCCCAGTTGCCTAGACAGTTAGGAGTGAAACCAATGACTGGCATTTTGTTGCATGGACCACCCGGCTGTGGTAAAACTAGGTTGGCTTATGCTATTGCTAATGAGACTGGTCTTCCTTTCTATCAGATTTCAGCCACTGAGGTAGTTTCTGGAGTCTCAGGTGCATCTGAAGAAAATATTAGAGAGCTTTTTTCTAAAGCATACAGGACTGCCCCATCAATTGTCTTTATTGATGAGATTGATGCAATTGCTTCAAAAAGAGAGAATTTACAGCGTGAGATGGAGAAAAGAATTGTGACACAGTTAATGACTTGCATGGATCAATCAAACAGGATTCTTCAACCAGCTGATGGTTCAGAGAGTTCTGATGGTCCTCCTGGCCATGTTCTTGTGATTGGAGCCACAAATAGGCCTGATGCTGTTGACCCTGCCCTAAGAAGGCCTGGTCGGTTTGACCGTGAGATTATCGTTGGCATTCCTGATGAATCTGCCAGGGAGGAGATCCTTTACGTGCTTACCCGCAATCTTAAACTTGAGGGTTCCTTTGATATACGAAAAATAGCCAGGTCTACACCAGGATTTGTTGGTGCTGATTTGGTGGCTCTGGCTAACAAAGCTGGTAATCTAGCAATGAAGAGAATAATTGATGAAAGGAAACGTGAATTATCTCAAGATCTCATGGGTGAGCATACCGAAGACTGGTGGAGGGAACCTTGGTTGCCTGAAGAAATCGATAAGCTTGCCATCAAAATGTCAGATTTTGAGGAAGCAGCCAAAATGGTGCAACCTTCATCAAGAAGAGAAGGTTTCTCTTCCATTCCAAACGTAAAATGGGAAGATGTTGGTGGGCTTGATCTTTTAAGACAGGAGTTTGAACACTATATTGTAAGGCGTATAAAACATCCTGAGGTTTATGAGGGGTTTGGGGTGGATCTTGAGACAGGATTTTTGCTTTATGGACCTCCAGGTTGTGGTAAAACACTGATTGCCAAAGCTGTTGCCAATGAGGCAGGAGCTAATTTTATTCATATAAAGGGACCTGAACTTTTAAATAAATATGTTGGAGAAAGTGAGCTTGCAGTTCGGACATTGTTTAGTCGTGCAAGGACATGTGCACCTTGTATACTGTTTTTCGATGAGGTGGATGCCTTGACAACCCAACGTGGCAAAGAAGGTGGATGGGTTATAGAACGACTATTGAACCAGTTGCTTATCGAGTTAGACGGTGCAGAGCAGCGAAGAGGTGTTTTTGTGATTGGTGCAACAAATAGGCCTGAGGTAATGGATCGTGCTATCCTACGACCCGGAAGGTTTGGTAAACTTCTTTATGTTCCTCTTCCAAGCCCAGACGAGCGAGTTTTGATATTGAAAGCTCTTGCAAGGAAGAAACCTGTTGATGCCAGTGTGGATTTGAATGCCATAGGAAGATTGGAAGCTTGTGAAAACCTGAGTGGGGCTGATCTTGCTGCATTGATGAACGAAGCAGCAATGGCCGCTCTTCAAGAGAAGTTGGCCTCAACTGAGACAACTTGTGATGCAGTGACCATCAAGACGAGTCATTTTGAAGTAGCCCTGAGTAAAGTCTCTCCCTCTGTGTCAGACACGCAAAAGCAGTACTATCAACATTTGTCAGTGCGCTTTAAAGCAGCTTGA 2379 0.4481 MARRNRGRRSLQETLRRRVESCKSRYSTTDEIVNHLRSTYPDYKLTKLKTLTRFVREANDNDDDDDDEGRSGSLKKQKKTDVAEERLQKMEALHLSRRMQSNQTPSTSSDSSSESDEEDGSTSVSTSEDAIYGQKVEPAFDLMKTMLRNSYAGTKVVAEEKNVELEVANSSKATLTVNNEGGGGGESEGEAKSARKLSKGSVSYGGGGGEVKGNEGPRFRDLGGMKEVLEELKMEVIVPLYHPQLPRQLGVKPMTGILLHGPPGCGKTRLAYAIANETGLPFYQISATEVVSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKRENLQREMEKRIVTQLMTCMDQSNRILQPADGSESSDGPPGHVLVIGATNRPDAVDPALRRPGRFDREIIVGIPDESAREEILYVLTRNLKLEGSFDIRKIARSTPGFVGADLVALANKAGNLAMKRIIDERKRELSQDLMGEHTEDWWREPWLPEEIDKLAIKMSDFEEAAKMVQPSSRREGFSSIPNVKWEDVGGLDLLRQEFEHYIVRRIKHPEVYEGFGVDLETGFLLYGPPGCGKTLIAKAVANEAGANFIHIKGPELLNKYVGESELAVRTLFSRARTCAPCILFFDEVDALTTQRGKEGGWVIERLLNQLLIELDGAEQRRGVFVIGATNRPEVMDRAILRPGRFGKLLYVPLPSPDERVLILKALARKKPVDASVDLNAIGRLEACENLSGADLAALMNEAAMAALQEKLASTETTCDAVTIKTSHFEVALSKVSPSVSDTQKQYYQHLSVRFKAA* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00159 792 PANTHER AAA-FAMILY ATPASE 84 790 - -
Rops11g00159 792 ProSitePatterns AAA-protein family signature. 371 389 IPR003960 GO:0005524|GO:0016887
Rops11g00159 792 FunFam Ribosome biogenesis ATPase RIX7 209 400 - -
Rops11g00159 792 ProSitePatterns AAA-protein family signature. 658 676 IPR003960 GO:0005524|GO:0016887
Rops11g00159 792 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 506 IPR027417 -
Rops11g00159 792 FunFam ATPase, AAA family protein 516 695 - -
Rops11g00159 792 Gene3D - 402 510 - -
Rops11g00159 792 MobiDBLite consensus disorder prediction 68 93 - -
Rops11g00159 792 MobiDBLite consensus disorder prediction 95 111 - -
Rops11g00159 792 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 516 785 IPR027417 -
Rops11g00159 792 MobiDBLite consensus disorder prediction 1 26 - -
Rops11g00159 792 MobiDBLite consensus disorder prediction 175 218 - -
Rops11g00159 792 MobiDBLite consensus disorder prediction 58 130 - -
Rops11g00159 792 Pfam AAA+ lid domain 424 459 IPR041569 -
Rops11g00159 792 Pfam AAA+ lid domain 710 748 IPR041569 -
Rops11g00159 792 Pfam ATPase family associated with various cellular activities (AAA) 257 399 IPR003959 GO:0005524|GO:0016887
Rops11g00159 792 Pfam ATPase family associated with various cellular activities (AAA) 559 687 IPR003959 GO:0005524|GO:0016887
Rops11g00159 792 Gene3D - 516 782 IPR027417 -
Rops11g00159 792 Gene3D - 689 768 - -
Rops11g00159 792 Gene3D - 211 400 IPR027417 -
Rops11g00159 792 MobiDBLite consensus disorder prediction 1 25 - -
Rops11g00159 792 FunFam Cell division control protein 48 homolog C 402 510 - -
Rops11g00159 792 SMART AAA_5 253 403 IPR003593 GO:0016887
Rops11g00159 792 SMART AAA_5 554 690 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00159 Rops-Chr11 2163406 2169014 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00159 489 790 Calmodulin-binding Proteins AT3G56690 43.750 2.99e-71 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00159 K14571 - gmx:100809594 1169.84