Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00151 ATGGAGAGCAATTTCTGTTCCTATAACTCTCACCTAGCCTCTAGCTTGAAGAAGAGTTATAGGAAGCACCAGCATGATCATTCAGAACAGCATCATCTTCAAGAAGATGATATGTTTCCATCTTTCAATCTGCGGAATATTTCAAAGCTCATTCTTCCTCCACTGGGTGTTTCAAAACAGAATCCGGTTAACTCAAAAGGGTGGATCATATCTCCAATGGATTCTAGATACAGGTGTTGGGAGAGTTTTATGGTTCTTCTGGTGGCTTATTCTGCATGGGTGTATCCCTTTGAAGTTGCTTTCATGCACTCTTCTCCAAATAAGAATATCTATATTGTGGACAACATTGTTGATCTTTTCTTTACTGTTGATATTGTTATGACATTCTTCGTGGCTTATATTGATCGAACAACTCATCTACTAGTTCGAGACTCCAAAAAGATTGCAGTAAGGTATTTGCGAACATGGTTCCTAATGGATGTAGCATCAACTATACCATATGAAGCAATAGGGTATTTGTTAACTGGTAAACACAAAGTGGGTCTCCCTTACTTCCTGTTGGGCTTGCTCAGATTGTGGAGAATCAGACGGGTCAAACAGTACTTCACAAGGCTTGAGAAAGACATCAGGTTCAACTATTTCTGGATCAGATGTGCTAGGCTTCTTTCTGTAACACTTTTTTCAGTTCATTGTGCTGGGTGCCTCTATTACATGCTAGCTGATCGGTACCCCCACCAAGGAAAGACATGGATTGGAGCTGTGATACCAAACTTCAGAGAGACAAGCCTTAGGATCAGATACATTTCAGCCATCTACTGGTCCATCACAACCATGACCACTGTAGGTTATGGTGATCTTCATGCAGTGAACAACATGGAAATGATTTTCATTATTTTCTACATGCTCTTCAACCTTGGCCTAACTGCTTACTTGATTGGCAACATGACAAATCTTGTTGTTGAAGGGACTCGCCGTACCATGGAATTTAGAAATAGCATTGAATCAGCATCAAACTTTGTGTGCCGAAATCGATTGCCTCTAAGGTTAAGAGAGCAGATCCTGGCTTACATGTGTTTAAGATTTAAGGCAGAGAGCTTGAATCAGCATCAGCTTATTGAACAGCTACCAAAGTCGATTTGCAAAAGCATCTGCCAGCATTTGTTTTTTGAAACTGTAGAGAAAGTTTATCTCTTCAAAGGCGTCTCAAAAGAAATTCTTTTGTCCCTTGTTGCAAAAATGAAGGCAGAATATATACCACCTAGAGAGGATGTTATCATGCAAAATGAAGCACCAGATGATGTTTACATTATAGTGTCTGGAGAAGTGGAGATCATCAATACTGTACTAGAGAGAGAGAGAATTTTAGGGACTCTACAAACAGGTGACATGTTTGGAGAAGTTGGTGCACTTTGTTGTAGACCTCAGTGCTTTACCTACAGAACCAAGACTCTCACACAGCTCCTGAGGCTGAAAACCAATACTCTTATTGAAGCAATGCAGATTAAAAAAGAAGACAATATACAAATACTAAAAAATTTCCTTCAGCATTTCAAGCAGCTTAAGGATCTGAGTATCAGAGATTTGATGGTGGAGAATGTGGAAGAAGATGACCCTAACATGGCCGTGAACTTGTTAACTGTGGCCAGCACAGGTAATGCTGCTTTTCTTGAGGAGCTTCTAAGAGCAGGTTTGGATCCTGACATTGGAGACTCCAAAGGGAAAACCCCATTGCACATTGCAGCAGCAAATGGGCATGAAGAGTGTGTTAAAGTCTTACTCAGGCACAAATGCAACATACATATAAGAGACATGAATGGTGACACTGCATTATGGGATGCTATAGCATCAAAACACCACTCCGTATTCCGGATGCTCTACCCTCTAGCTGCTCTCTCTGATCCACACATAGCAGGCAATCTCCTATGTACAGCAGCTAAAAGAAATGATTTAACAGTGATGAATGAGCTTCTAAAGCAAGGATTGGACATTGACTCTAAAGATCGCCATGGTATAACAGCAATCCAAATTGCCATGGCAGAAAATCATGTTGACATGGTTCAGTTGCTTGTCATGAATGGTGCAGATGTCTCTGATGTACACACTCATGAATTTTCCACATCCATCTTAAATGAAATGCTGCAGAAGCGTGAAATTGGGCATCAAATTACTGTAAATGAGTCCATGCCTAGTGAGGTTGTATCAAGGGGGAAGCATCAAGAAGAGCAGGAGTCCATTAGGGGAAGATCAAATGTACTAATGTGTCCAAGAGTAAGCATATATAGAGGTCATCCTGTAGTGAGAAGAGAAAAAGGTGTCATGGAAGCTGGGAGGCTAATAAGGTTGCCTGATTCATTGGAAGAGCTCAAAACTATTGCAGGTGAAAAATTTGGGTTTGATGCAAGAGATGCAATGGTGACAGATGAAGAAGGAGCAGAAATAGACAGTATTGATGTGATCAGAGATAATGATAAACTCTTTTTTGTTGAGTAG 2490 0.4052 MESNFCSYNSHLASSLKKSYRKHQHDHSEQHHLQEDDMFPSFNLRNISKLILPPLGVSKQNPVNSKGWIISPMDSRYRCWESFMVLLVAYSAWVYPFEVAFMHSSPNKNIYIVDNIVDLFFTVDIVMTFFVAYIDRTTHLLVRDSKKIAVRYLRTWFLMDVASTIPYEAIGYLLTGKHKVGLPYFLLGLLRLWRIRRVKQYFTRLEKDIRFNYFWIRCARLLSVTLFSVHCAGCLYYMLADRYPHQGKTWIGAVIPNFRETSLRIRYISAIYWSITTMTTVGYGDLHAVNNMEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIESASNFVCRNRLPLRLREQILAYMCLRFKAESLNQHQLIEQLPKSICKSICQHLFFETVEKVYLFKGVSKEILLSLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEIINTVLERERILGTLQTGDMFGEVGALCCRPQCFTYRTKTLTQLLRLKTNTLIEAMQIKKEDNIQILKNFLQHFKQLKDLSIRDLMVENVEEDDPNMAVNLLTVASTGNAAFLEELLRAGLDPDIGDSKGKTPLHIAAANGHEECVKVLLRHKCNIHIRDMNGDTALWDAIASKHHSVFRMLYPLAALSDPHIAGNLLCTAAKRNDLTVMNELLKQGLDIDSKDRHGITAIQIAMAENHVDMVQLLVMNGADVSDVHTHEFSTSILNEMLQKREIGHQITVNESMPSEVVSRGKHQEEQESIRGRSNVLMCPRVSIYRGHPVVRREKGVMEAGRLIRLPDSLEELKTIAGEKFGFDARDAMVTDEEGAEIDSIDVIRDNDKLFFVE* 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00151 829 FunFam Potassium channel SKOR 78 320 - -
Rops11g00151 829 Gene3D - 541 716 IPR036770 -
Rops11g00151 829 Pfam Ion transport protein 78 326 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Rops11g00151 829 FunFam Potassium channel KAT2 385 521 - -
Rops11g00151 829 PANTHER POTASSIUM CHANNEL AKT1 44 828 IPR045319 GO:0005249|GO:0006813
Rops11g00151 829 SUPERFAMILY cAMP-binding domain-like 324 516 IPR018490 -
Rops11g00151 829 ProSiteProfiles cAMP/cGMP binding motif profile. 397 516 IPR000595 -
Rops11g00151 829 Pfam Cyclic nucleotide-binding domain 417 500 IPR000595 -
Rops11g00151 829 Pfam KHA, dimerisation domain of potassium ion channel 755 827 IPR021789 -
Rops11g00151 829 Gene3D Jelly Rolls 365 537 IPR014710 -
Rops11g00151 829 PRINTS EAG/ELK/ERG potassium channel family signature 125 134 IPR003938 GO:0005249|GO:0006813|GO:0016020
Rops11g00151 829 PRINTS EAG/ELK/ERG potassium channel family signature 293 304 IPR003938 GO:0005249|GO:0006813|GO:0016020
Rops11g00151 829 PRINTS EAG/ELK/ERG potassium channel family signature 267 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Rops11g00151 829 PRINTS EAG/ELK/ERG potassium channel family signature 311 320 IPR003938 GO:0005249|GO:0006813|GO:0016020
Rops11g00151 829 PRINTS EAG/ELK/ERG potassium channel family signature 114 124 IPR003938 GO:0005249|GO:0006813|GO:0016020
Rops11g00151 829 ProSiteProfiles Ankyrin repeat region circular profile. 572 603 - -
Rops11g00151 829 ProSiteProfiles KHA domain profile. 756 829 IPR021789 -
Rops11g00151 829 Pfam Ankyrin repeats (many copies) 640 690 IPR002110 GO:0005515
Rops11g00151 829 ProSiteProfiles Ankyrin repeat region circular profile. 669 697 - -
Rops11g00151 829 Pfam Ankyrin repeats (3 copies) 548 626 IPR002110 GO:0005515
Rops11g00151 829 ProSiteProfiles Ankyrin repeat profile. 572 604 IPR002110 GO:0005515
Rops11g00151 829 Gene3D - 78 320 - -
Rops11g00151 829 SMART ANK_2a 605 636 IPR002110 GO:0005515
Rops11g00151 829 SMART ANK_2a 572 601 IPR002110 GO:0005515
Rops11g00151 829 SMART ANK_2a 539 568 IPR002110 GO:0005515
Rops11g00151 829 SMART ANK_2a 639 665 IPR002110 GO:0005515
Rops11g00151 829 SMART ANK_2a 669 698 IPR002110 GO:0005515
Rops11g00151 829 CDD CAP_ED 397 510 IPR000595 -
Rops11g00151 829 SUPERFAMILY Voltage-gated potassium channels 72 320 - -
Rops11g00151 829 ProSiteProfiles Ankyrin repeat profile. 669 701 IPR002110 GO:0005515
Rops11g00151 829 PRINTS Ankyrin repeat signature 573 588 IPR002110 GO:0005515
Rops11g00151 829 PRINTS Ankyrin repeat signature 685 699 IPR002110 GO:0005515
Rops11g00151 829 SMART cnmp_10 397 514 IPR000595 -
Rops11g00151 829 SUPERFAMILY Ankyrin repeat 504 699 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00151 Rops-Chr11 2024395 2030171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00151 1 577 Ion Channels AT4G22200 72.041 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00151 K21867 - gmx:100798422 1408.28