Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00142 ATGGAGAAGTACGAGCTAGTGAAGGATATAGGATCTGGGAATTTCGGGGTGGCTAGGCTCATGCGTCACAAAGAAACCAAGGAGCTTGTTGCCATGAAATACATTGAAAGGGGTCACAAGATTGATGAGAATGTTGCAAGGGAAATCATAAACCATAGAAGTCTTCGCCATGCGAATATTATTCGGTTCAAGGAGGTGGTTTTGACTCCCACACATCTTGGTATAGTTATGGAGTATGCAGCAGGTGGAGAGCTCTTTGAGCGAATTTGCAATGCTGGAAGATTTAGCGAAGATGAGGCTCGATATTTCTTCCAGCAGCTCATCTCAGGAGTTAGCTACTGTCATTCCATGCAAATTTGCCATCGAGACTTGAAGCTGGAAAACACTTTATTGGATGGCAGCCCTGCACCACGGCTCAAAATTTGTGATTTTGGTTATTCTAAGTCATCTCTGCTTCATTCTAGGCCTAAATCAACAGTGGGAACTCCAGCCTACATTGCACCAGAGGTTCTTTCACGCAGAGAATATGATGGAAAGTTGGCAGATGTATGGTCCTGTGGAGTAACTCTTTATGTAATGCTGGTGGGAGCATACCCATTTGAGGACCAAGAGGATCCCAAAAACTTCAGGAAAACCATCAATCGAATTATGGCTGTTCAATACAAGATTCCAGATTATGTTCACATATCTCAAGACTGTAGACATCTGCTGTCTCGCATTTTTGTGGCAAATCCTGCTAGGAGAATCACCATTAAGGAAATCAAGTCCCACCCATGGTTTTTAAAGAATTTGCCTAGAGAATTGACAGAAATGGCTCAAGCTGTCTACTACAGAAAAGAAAACCCAACCTTTTCTCTTCAGAGTATAGAAGACATCATGAATATTGTTGAAGAGGCCAAAACTCCACCTCCAGCATCCAGGTCAATTGGAGGATTTGGTTGGGGAGAAGAAGATGATGAAACTAAAGAAGAAGCAGAGGCTGAGGTGGAAGAAGATGAGTATGAAAAGAGAGTCAAGGAGGCACAGGCTAGTGGAGAATTTCATGTCAGTTAA 1053 0.4283 MEKYELVKDIGSGNFGVARLMRHKETKELVAMKYIERGHKIDENVAREIINHRSLRHANIIRFKEVVLTPTHLGIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTINRIMAVQYKIPDYVHISQDCRHLLSRIFVANPARRITIKEIKSHPWFLKNLPRELTEMAQAVYYRKENPTFSLQSIEDIMNIVEEAKTPPPASRSIGGFGWGEEDDETKEEAEAEVEEDEYEKRVKEAQASGEFHVS* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00142 350 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Rops11g00142 350 FunFam Serine/threonine-protein kinase SRK2A 80 268 - -
Rops11g00142 350 PANTHER SERINE/THREONINE KINASE 2 298 - -
Rops11g00142 350 Coils Coil 317 344 - -
Rops11g00142 350 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00142 350 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00142 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Rops11g00142 350 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Rops11g00142 350 CDD STKc_SnRK2 3 259 - -
Rops11g00142 350 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00142 350 MobiDBLite consensus disorder prediction 302 350 - -
Rops11g00142 350 SUPERFAMILY Protein kinase-like (PK-like) 2 298 IPR011009 -
Rops11g00142 350 MobiDBLite consensus disorder prediction 317 331 - -
Rops11g00142 350 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Rops11g00142 350 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00142 Rops-Chr11 1924177 1927494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00142 3 263 CBL-interacting serine-threonine protein kinases AT4G24400 43.333 3.26e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Rops11g00142 Pkinase 9.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00142 K14498 - gmx:100812259 661.759