Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00137 ATGGATAATCATAGTGAGGGTGGTCACATTCCCCCAAAGCCTCCCCCAAAGCCTCCACGTCCACGTCCACCACGTAAGATCTCTGAATCCGAACCACTTTTGCATGGTGACTTAGATCTCTGGATATTAGAAGCTAAATCTCTTCCCAATTTGGATTTCTCCACTGAAGCATTGCGCAAATGTTTGACCGTTGGAAACCTTTGCTCCCCTCCTTTCGTCAAAGGACTCAAGACTCCTTCTGGCAAACACAAAATGATAACCAGTGATCCTTACGTCTCCGTGTGCCTCGCTGGTGCCACCATTGCTCAAACTAGAGTCATTTCCAATTGCGAAAACCCTTTATGGGATGAGCATTTTGTTGTCCCCGTTGCTCACCCTGCTCCCAAATTGGAATTCCTTGTCAAAGACAATGATGTTCTTGGGGCTGAACTCATTGGAGTAGTGGAGATATCTGTTAACAAGATTCTCTCTGGAAATATCATCAATGATTGGTTTCCAATCATTGGCCATTTTGGATGTTGCTTGAAATCTTATCCTGAGTTGCATATATCTGTTCAGTTTAGGCCTGTTGGAGTTGACCCTCCTCCAGAGTCTGATTCTCTGGGACTGGGAGTTCCTAATACATATTTTCCTCTTAGAATCGGAGGGAGTGTGACTCTATATCAAGATGCACATGTACCAGATGATAAGTTGCCTGAAATTCCACTTGAGGGTGGAAAGGTATTTCAGCATGGTAAATGTTGGGAGGAGATATGCCATGCCATTTTGGAAGCTCACCATTTAATATATATTACAGGTTGGTCAGTTTATCATCCTTTGAAGCTTATCAGAGAGCCAACAAAACCCTTGCCTTCTAGTGGAGAGCTTTCACTTGGAGAGTTGTTGAAATACAAGTCACAAGAAGGGGTTCGCGTGGTTATGCTCATTTGGGATGACAAAACTTCCCATGACAATTTTTTTTTGAAAACAGATGGTGTCATGCAGACTCACGATGAAGAAACTAAAAAGTATTTTAAACACTCCACTGTTCATTGTGTGCTTGCTCCTCGTTATGCAAGCAATAAGCTCAGTATTTTCAAGCAACAGGTTGTGGGAACCCTTTTTACGCACCATCAGAAGTGTGTGCTTGTAGACACTCAAGCTTCTGGGAATAATCGGAAAATAACAGCTTTTATTGGTGGTTTGGATCTCTGTGATGGCAGATATGATACTCCTGACCATCGGCTTTTTGATGATCTAGATACTGTCTTTAAAAATGATTTTCGAAATCCTACATTACCATCCAATTCGCACGGACCAAGGGAGCCATGGCATGACTTGCATTGCAAAATCGAGGGTCCAGCTGCATATGATATATTGACCAATTTTGAACAAAGATGGAAGAAAGCCAAAAAATGGCGTGACTTCAGGGTCAACAAGGTGTCAACTTGGCATGATGATCCTTTGTTAAGCCTAGAACGACTTTCGTGGATTCTCACTCCATCTTCTGGTCCTGACGGTGATAAAGCTGTTCGTGTAACTAACGAGGATGATCCTGAGAGTTGGCATGTGCAGGTATTTCGGTCAATAGATTCAGGATCTGTGAAGGGTTTTCCAAAGGATGTTCAGGCAGCAAGGGCTCAGAATCTTGTCTGTGGAAAAAATTTGAAAATAGATAAAAGCATCCATACTGCTTATGTAAAAGCAATAAGATCAGCTCAACACTTCATATACATTGAGAATCAGTATTTTCTGGGATCCTCATATCAATGGTCTTCACACAAAAGTGCAGGTGCAAATCACTTGGTCCCCATGGAATTGGCTTTAAAAATTGCCAGCAAAATCAGTGCAAATGAACGTTTTTCTGTGTACATAGTTATACCAATGTGGCCAGAGGGGGTTCCCAATTGTGCTTCTGTTCAAGAAATTTTGTTCTGGCAGGGACAGACAATGTCAATGATGTACAGGCATGTTGCCGATGCGCTTAAAAAGGCAGGTCTTTCCAATCAATATCATCCACAAGATTATCTCAATTTTTACTGTCTTGGAAAGCGTGAACCTCAATCCTCAGAAAGTTCATCAACACCAATTCACCCATCGGAAAACCGTGTTTTGGTTTCCCCCAATAAAACCAGACGTTTTATGATTTATGTTCATGCTAAAGGAATGATAGTTGATGATGAATACCTAATCATGGGATCTGCAAATATTAACCAGAGATCCTTGGATGGTTCAAGAGACACAGAAATAGCTATTGGTGCTTATCAGCCAAAGTATACATGGAAAGAAAAGAATTCTCATCCACACGGCCAGGTGTATGGTTACCGAATGTCTCTATGGGCGGAGCACCTTGATAGTGTTGATGAAACTTTTGCAGAACCACGCAACCTAGAATGTGTTAGATATGTGAACAAAATAGCCAGAGAAAACTGGGATGCATACGTATCTGAGGAAGGGAAAGAGATGAGGGGACATTTGATGCAGTATCCAATTAAGGTCAGCCAGGATGGAAAAGTCAGTACACTGCCAGACTACGAGTCTTTTCCTGATGTTGGTGGCAAAATTCTGGGATCAGCCAATTCTCTTCCGGATGCACTAACCACGTGA 2586 0.4211 MDNHSEGGHIPPKPPPKPPRPRPPRKISESEPLLHGDLDLWILEAKSLPNLDFSTEALRKCLTVGNLCSPPFVKGLKTPSGKHKMITSDPYVSVCLAGATIAQTRVISNCENPLWDEHFVVPVAHPAPKLEFLVKDNDVLGAELIGVVEISVNKILSGNIINDWFPIIGHFGCCLKSYPELHISVQFRPVGVDPPPESDSLGLGVPNTYFPLRIGGSVTLYQDAHVPDDKLPEIPLEGGKVFQHGKCWEEICHAILEAHHLIYITGWSVYHPLKLIREPTKPLPSSGELSLGELLKYKSQEGVRVVMLIWDDKTSHDNFFLKTDGVMQTHDEETKKYFKHSTVHCVLAPRYASNKLSIFKQQVVGTLFTHHQKCVLVDTQASGNNRKITAFIGGLDLCDGRYDTPDHRLFDDLDTVFKNDFRNPTLPSNSHGPREPWHDLHCKIEGPAAYDILTNFEQRWKKAKKWRDFRVNKVSTWHDDPLLSLERLSWILTPSSGPDGDKAVRVTNEDDPESWHVQVFRSIDSGSVKGFPKDVQAARAQNLVCGKNLKIDKSIHTAYVKAIRSAQHFIYIENQYFLGSSYQWSSHKSAGANHLVPMELALKIASKISANERFSVYIVIPMWPEGVPNCASVQEILFWQGQTMSMMYRHVADALKKAGLSNQYHPQDYLNFYCLGKREPQSSESSSTPIHPSENRVLVSPNKTRRFMIYVHAKGMIVDDEYLIMGSANINQRSLDGSRDTEIAIGAYQPKYTWKEKNSHPHGQVYGYRMSLWAEHLDSVDETFAEPRNLECVRYVNKIARENWDAYVSEEGKEMRGHLMQYPIKVSQDGKVSTLPDYESFPDVGGKILGSANSLPDALTT* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00137 861 ProSiteProfiles C2 domain profile. 19 165 IPR000008 -
Rops11g00137 861 SUPERFAMILY Phospholipase D/nuclease 205 470 - -
Rops11g00137 861 CDD C2_plant_PLD 30 188 - -
Rops11g00137 861 SMART C2_3c 37 164 IPR000008 -
Rops11g00137 861 Gene3D Endonuclease Chain A 505 760 - -
Rops11g00137 861 Pfam Phospholipase D Active site motif 367 401 IPR001736 GO:0003824
Rops11g00137 861 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 707 734 IPR001736 GO:0003824
Rops11g00137 861 Pfam C2 domain 36 167 IPR000008 -
Rops11g00137 861 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 33 190 IPR035892 -
Rops11g00137 861 PANTHER PHOSPHOLIPASE D 32 851 IPR015679 -
Rops11g00137 861 SMART pld_4 707 734 IPR001736 GO:0003824
Rops11g00137 861 SMART pld_4 366 401 IPR001736 GO:0003824
Rops11g00137 861 Gene3D C2 domain 33 187 IPR035892 -
Rops11g00137 861 SUPERFAMILY Phospholipase D/nuclease 532 779 - -
Rops11g00137 861 Gene3D Endonuclease Chain A 240 481 - -
Rops11g00137 861 FunFam Phospholipase D delta 238 480 - -
Rops11g00137 861 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 366 401 IPR001736 GO:0003824
Rops11g00137 861 Pfam PLD-like domain 706 745 IPR025202 -
Rops11g00137 861 PIRSF PLD_plant 24 861 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Rops11g00137 861 MobiDBLite consensus disorder prediction 1 30 - -
Rops11g00137 861 Pfam Phospholipase D C terminal 781 851 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00137 Rops-Chr11 1876986 1885577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00137 33 860 Phospholipase D Gene Family (Wang group) AT2G42010 54.114 0.0 922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00137 K01115 - gmx:100779740 1406.73