Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00133 ATGAAAGGATTTGAGTTTTCAACATCTGCGAAAAGTAAGAGAGAGAGAGAGGTGAGTGCTTGTCCATACCATACCCTAGGAGAGAGAAACTTTGCTTTGATTTCAAGCCCTTTACGCATTGCATTTCGGGATCTCGAATCTTCAATCCGCAAAGGTATTGGTTCTGCTTTCATGGCAAATTCAAAGGGTTCATCAGGCATCAGAAATTTGATGTATTCTGGAAGGCATGCTCTGCTTCCTCCTAAAATCCCATTCCCCATTGGTTCCCAAGCATATGCTGATTATTACATGCCAAAACCTGCAATTGGTTCAAAGGCTGTGCAGAAACCTAGAGAGGGAAACCCACACCACCACCGTACTTCATCTGAGAGCTTTGTTATAGAGGAGCAGCCTTCATGGCTTGATGATCTCCTTAATGAGCCGGAGACACCTGTTCGAAGGGGTGGACATCGGCGTTCATCAAGCGATTCTTTTACGTACTTAGACACAAGCAATGTTTCTAACTTCAGTTATGCAGATCAGGATGAATATAAATTTAGGAATTTGGCATCTTGGTCATCTCAAGACTTTGATCACAGCAAAGATGCTCATCATATACCCTTGAGTACAGAAACAAACTCAACAAAACTGAAAATTAGGGCATGGGACTCTTGTTTAAATGCTACCCATCCAGGTGGTTGTCTCTCTGGCAAAGACAATGTTGCTTTTCAGCATTCAGGATCGTCATCTCCACCGCATGAAGCAGATGGGGTTCCATCCACTGCAAATGAAAAGCTTGATTCAGTAGAATCTGGTGCCCACAATGTGAAATCATCTTCTGAAAGAAAGGATGGTTCAAATGCTAAGTCATCTGCTTCTGAAACAGATACAACAAAACGTGCTAAACAGCAATTTGCTCAACGTTCACGGGTCCGTAAACTTCAATACATAGCTGAACTGGAAAGAAATGTACAAGGTTTACAGGCAGAAGGATCTGAAGTATCAGCTGAGCTTGAATTTCTTAACCAGCGGAATCTGATCCTTAGTATGGAGAATAAAACTCTCAAGCAACGCTTAGAAAGTCTAGCTCAAGAGAAGCTTATCAAATATTTGGAGCAAGAAGTGCTGGAAAGAGAGATTGGAAGGTTACGGGCATTATATCAGCAGCAACAGCAGCCGTCACAGCAACCATCAGCCAGCCTGCCTAGCCATCGACGCACAAATAGCAGAGACCTTGAAACCCAGTTTGCAAACCTTTCTATAAAACAAAGGGACACCAATTCAGGGCGTGATCCTGTGACGGGGGCACTTCGAATTTAG 1299 0.4319 MKGFEFSTSAKSKREREVSACPYHTLGERNFALISSPLRIAFRDLESSIRKGIGSAFMANSKGSSGIRNLMYSGRHALLPPKIPFPIGSQAYADYYMPKPAIGSKAVQKPREGNPHHHRTSSESFVIEEQPSWLDDLLNEPETPVRRGGHRRSSSDSFTYLDTSNVSNFSYADQDEYKFRNLASWSSQDFDHSKDAHHIPLSTETNSTKLKIRAWDSCLNATHPGGCLSGKDNVAFQHSGSSSPPHEADGVPSTANEKLDSVESGAHNVKSSSERKDGSNAKSSASETDTTKRAKQQFAQRSRVRKLQYIAELERNVQGLQAEGSEVSAELEFLNQRNLILSMENKTLKQRLESLAQEKLIKYLEQEVLEREIGRLRALYQQQQQPSQQPSASLPSHRRTNSRDLETQFANLSIKQRDTNSGRDPVTGALRI* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00133 432 MobiDBLite consensus disorder prediction 381 401 - -
Rops11g00133 432 MobiDBLite consensus disorder prediction 105 126 - -
Rops11g00133 432 MobiDBLite consensus disorder prediction 138 157 - -
Rops11g00133 432 Coils Coil 303 358 - -
Rops11g00133 432 CDD bZIP_plant_RF2 291 338 IPR044759 GO:0003700|GO:0006355
Rops11g00133 432 Gene3D - 292 344 - -
Rops11g00133 432 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 67 414 IPR044797 -
Rops11g00133 432 MobiDBLite consensus disorder prediction 381 398 - -
Rops11g00133 432 SUPERFAMILY Leucine zipper domain 299 341 IPR046347 GO:0003700|GO:0006355
Rops11g00133 432 MobiDBLite consensus disorder prediction 110 124 - -
Rops11g00133 432 SMART brlzneu 288 347 IPR004827 GO:0003700|GO:0006355
Rops11g00133 432 MobiDBLite consensus disorder prediction 236 299 - -
Rops11g00133 432 MobiDBLite consensus disorder prediction 283 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00133 Rops-Chr11 1841355 1848042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00133 77 362 bZIP Transcription Factor Family AT3G58120 32.558 6.36e-23 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00133 - - gmx:100813098 518.464