Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00132 ATGGGTATGGGTAACATTTTGATTTTGATATTCTTCTCCATCATTGTCTCCATATCACCCTCTTATGGATACGATCCGTTGGATCCTTTTGGCAATATTACCATCACATGGGATTTCTTGTCTGATAATGGAGATACAGTCGATGTGAGGGTATCATTGTACAACTTCCAACTATTTCGGCATGTGGAAGAGCCTGGTTGGAGATTGGGTTGGGCTTGGAAAGGTGATGAGGTGATTTGGGCAATGTTGGGAGCAGAGGCTACAGAGCAAGGGGATTGCTCAAGAATCAAAGGAGAAAAGCAACCCCATTGTTGTGAGAAGGAGCCAGTTATTGTTGATCTTATACCTGGAACCCCATACAACCTGCAATCTGCCAATTGCTGTAAAGGAGGGGTCCTAACATCCATGACACAAGATGTTACCAAATATGGTGCCTCCTTCCAGATGAATTATATGAAATCATCAATCTCCATTCCAGAAGGTAGCAATTATAGCATGCCAGAAAATTTCACCCTTGGAATTCCTGGTTATACCTGTGGCCCACCATTTCAAGTCCCACCAACCAAGTTTACCACCGATGGACGCCGATGGCAACAAGTCTTAGAGACGTGGAATGTGACCTGTATTTACTCCCAGTTTCTAGCATCACCTGCTCCAAAATGCTGTGTCTCCTTGTCTGCATTCTACAATAGTACCGTTGTTCCTTGCCCCATATGCAGCTGTAATTGCCAAGGGCTACCAGGAGCAAATTGTGTGAATTCTGATAAGACTTCAGTGTTGCAACTGCCACAAGCACGTGATGGAGAAGCACCATCACCAGTGGTCAGGTGTTCACGTCACATGTGTCCCATTCGTGTTCACTGGCATGTGAAACAAAGTTATAGAGAGTATTGGCGGATCAAGATCACAATCACAAATCTGAACTTTGTCAAAAACTATTCACAGTGGAATTTGGTGGTGTTACACCCCAACTTGCGAAGTATAACCCAAGTTTTCAGTTTCAGCTACAGACCACTGCCAATTTATGGAAACCTGAATGATACAGGGATGTTTTGGGGACTACAGTACTACAATGACATGTTGCTGGCACATGGGAACAATGGGAATGTACAAACAGAGGTGTTACTGCACAAAGATAAAGGAAACTTCACCTTCAAAGAAGGATGGACTTTTCCGAGAAAAATTTCATTTAATGGTGATGAATGTGTCATGCCATCTCCTGACGCCTACCCAAGCCTCCCTAACACAGCTCCTATTGCCAAAACAACCCCTCTTATACTTTTCTTCCCAATGTTACTGCTCTCAATATTGTTTTAA 1317 0.4336 MGMGNILILIFFSIIVSISPSYGYDPLDPFGNITITWDFLSDNGDTVDVRVSLYNFQLFRHVEEPGWRLGWAWKGDEVIWAMLGAEATEQGDCSRIKGEKQPHCCEKEPVIVDLIPGTPYNLQSANCCKGGVLTSMTQDVTKYGASFQMNYMKSSISIPEGSNYSMPENFTLGIPGYTCGPPFQVPPTKFTTDGRRWQQVLETWNVTCIYSQFLASPAPKCCVSLSAFYNSTVVPCPICSCNCQGLPGANCVNSDKTSVLQLPQARDGEAPSPVVRCSRHMCPIRVHWHVKQSYREYWRIKITITNLNFVKNYSQWNLVVLHPNLRSITQVFSFSYRPLPIYGNLNDTGMFWGLQYYNDMLLAHGNNGNVQTEVLLHKDKGNFTFKEGWTFPRKISFNGDECVMPSPDAYPSLPNTAPIAKTTPLILFFPMLLLSILF* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00132 438 PANTHER PROTEIN COBRA 11 428 IPR006918 GO:0010215|GO:0016020
Rops11g00132 438 Pfam COBRA-like protein 49 211 IPR006918 GO:0010215|GO:0016020
Rops11g00132 438 PIRSF COBRA 2 438 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00132 Rops-Chr11 1837050 1840403 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00132 2 414 COBRA Gene Family AT1G09790 56.699 7.44e-166 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00132 - - lang:109329241 725.317