Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00131 ATGGCGGTGTCACTGTGGAGAGGTCGTTTAGCTTCGTCGGCGTTCAACTTGTTCAACCATGCTCTTCGCCGTTTCTCTTCCGCCGCAGAGGTTAGAAACGGCATTCCTGATGGTGTGCGTGAGAGTATGATGTTTTCTGACATAAACTCACAGATCGGTAGTTGCATGCCTCTGTCTTCGATGCGAATCGGAACTATCATTCACAACATTGAGATGAAGCCAGGTCAAGGTGGGAAGCTGGTCCGAGCAGCTGGAACAAAGGCTAAGATCTTGAAAGACCCAACTTCAGCTTACTGTTTGATCCAATTACCCTCTGGTGTTAAAAAATTGATAGATTCTCGATGCAGGGCCACCGTTGGTGTGGTCTCTAATCCAACACATGGCGATCGTAAGCTTAGTAAGGCCGGACATAGCCGATGGCTTGGTCGAAGACCGGTGGTTAGAGGAGTGGCGATGAATCCGGTGGATCATCCTCATGGTGGTGGAGAGGGTAAGAGCAAGAGTAGTGGACGGTGGGGGAAAGGTTCTCGCACTCCTTGGGGTAAGCCTACTAAGGGTGGTTACAAGACTGGACCCCTCAAGCGCAGAAGGTAG 594 0.5067 MAVSLWRGRLASSAFNLFNHALRRFSSAAEVRNGIPDGVRESMMFSDINSQIGSCMPLSSMRIGTIIHNIEMKPGQGGKLVRAAGTKAKILKDPTSAYCLIQLPSGVKKLIDSRCRATVGVVSNPTHGDRKLSKAGHSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGRWGKGSRTPWGKPTKGGYKTGPLKRRR* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00131 197 PANTHER RIBOSOMAL PROTEIN L2 46 196 IPR002171 GO:0003735|GO:0005840|GO:0006412
Rops11g00131 197 FunFam 60S ribosomal protein L2, mitochondrial 46 122 - -
Rops11g00131 197 ProSitePatterns Ribosomal protein L2 signature. 145 156 IPR022671 GO:0003735|GO:0005840|GO:0006412
Rops11g00131 197 Gene3D Ribosomal protein L2, domain 3 123 197 IPR014726 -
Rops11g00131 197 Gene3D - 46 122 IPR014722 -
Rops11g00131 197 SMART Ribosomal_L2_C_2 50 183 IPR022669 GO:0003735|GO:0005840|GO:0006412
Rops11g00131 197 MobiDBLite consensus disorder prediction 151 197 - -
Rops11g00131 197 FunFam 50S ribosomal protein L2 123 197 - -
Rops11g00131 197 SUPERFAMILY Translation proteins SH3-like domain 52 187 IPR008991 -
Rops11g00131 197 Pfam Ribosomal Proteins L2, C-terminal domain 51 181 IPR022669 GO:0003735|GO:0005840|GO:0006412
Rops11g00131 197 NCBIfam 50S ribosomal protein L2 46 192 IPR005880 GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00131 Rops-Chr11 1833371 1834273 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00131 49 162 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 43.333 1.88e-23 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00131 - - gmx:100792418 307.375