Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00128 ATGGAACTATCAGATTTGCAAAACAACAAGCAGAGCAACAACAGAAGCAGTAGTCATCCCCACCATCACCACCATCAACAACACCAGCACCACCAAGAATCCTCTTCTTCTCATCAGCAGCAACAACAACTTGTGGTCCCTTTTGATGGCAGGCCATCACCCTTCATCATGGGCTCCATCTCCATCCAAGCTGGACTCACCACATCTTCATCTTCTTCGTCTTCTTCTTCTTCTTCCAATTCTTCATCATCTTCTTCTGCTGCTGCAACTGCTTCTGCCTCCGGTCCCACCCCTCACCTCATTGATGCTTCCTTAGCCATCGCCACCAGATCTGACCCCCCCATCATCGATTCCACCAAGAAGACCCAAATTCAACAACAACAATTATCCATCTCCACCACCACTTCCACCAACCCTCCCAAGCGATCAACCAAGGACAGGCACACCAAGGTCGACGGTCGTGGCCGGAGAATTCGAATGCCCGCCACGTGTGCCGCCAGGGTTTTCCAATTGACCAGGGAATTGGGACACAAGTCCGACGGAGAAACCATCGAGTGGCTCCTCCAGCAGGCGGAACCCGCGATCATCGCTTCCACCGGCACGGGAACAATCCCGGCGAATTTCTCCACCCTCAACGTCTCTCTCCGGAGCAGCGGGTCCACGCTGTCGGCTCCGCCGTCGAAGTCAGCCCCTCACACGTTTCATGGGGCTTTAGCACTGGCCCACCACCCTTACGAGGAAGCGTTTCAGCACACAGCTTTACTAGGGTTTCATCCTCAACACCAACATCAACACCAACAACAACAACACCTTATGAGCGCCGATCAAATCGCCGAAGCGCTTCCCGGCGGTGGTGGAGACTCGAACGAGAACTACATAAGGAAACGTTACAGGGAAGATCTGTTCAAAGATGATAATAACAACAACCAAAATGAAAGCGGTGATGGGTCTTCTCCAAAAGCATTCAAACCCAACCTTGAGTTGCCAAAGCAACACACAGATACAGATGGTGGTGCAGGCTCTTCTTCTTCTACTTCTTCAGCTTCAGCTTCTGGGCTTCTTAGACCTGCCACTGCCATGTGGGGTGCTCATGGCAGTGGCAGCGCAATTTGGATGCTTCCGGTGACTGCAGGTGGTGCCACATCGGAGAGTCACCAAACTATGTGGCCTGCTGCTTCTGGGAACGCTACTCCTCTTCATTTCATGCCAAGGTTCAATCTTCCAGGTGGTGTTGAGTTCCAAGAGTCAATTCAGTTCACCAAACTCATCATCCCTTGGAACATCAACATCAACACCAACCTCAATCTACTCAGAGTGGAGAAGATGGTCCTAATACATCTCAATGACTTGATTACAAGTTCAATTTGTGATGTGATTGCTTTCAAAAATCCATGGGTGCTTGCTCATCAGACTTGA 1416 0.5071 MELSDLQNNKQSNNRSSSHPHHHHHQQHQHHQESSSSHQQQQQLVVPFDGRPSPFIMGSISIQAGLTTSSSSSSSSSSSNSSSSSSAAATASASGPTPHLIDASLAIATRSDPPIIDSTKKTQIQQQQLSISTTTSTNPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIASTGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHTFHGALALAHHPYEEAFQHTALLGFHPQHQHQHQQQQHLMSADQIAEALPGGGGDSNENYIRKRYREDLFKDDNNNNQNESGDGSSPKAFKPNLELPKQHTDTDGGAGSSSSTSSASASGLLRPATAMWGAHGSGSAIWMLPVTAGGATSESHQTMWPAASGNATPLHFMPRFNLPGGVEFQESIQFTKLIIPWNININTNLNLLRVEKMVLIHLNDLITSSICDVIAFKNPWVLAHQT* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00128 471 MobiDBLite consensus disorder prediction 1 15 - -
Rops11g00128 471 MobiDBLite consensus disorder prediction 1 52 - -
Rops11g00128 471 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 76 403 IPR005333 GO:0003700
Rops11g00128 471 MobiDBLite consensus disorder prediction 66 93 - -
Rops11g00128 471 MobiDBLite consensus disorder prediction 33 47 - -
Rops11g00128 471 MobiDBLite consensus disorder prediction 335 351 - -
Rops11g00128 471 MobiDBLite consensus disorder prediction 300 351 - -
Rops11g00128 471 MobiDBLite consensus disorder prediction 141 155 - -
Rops11g00128 471 MobiDBLite consensus disorder prediction 66 97 - -
Rops11g00128 471 MobiDBLite consensus disorder prediction 115 140 - -
Rops11g00128 471 ProSiteProfiles TCP domain profile. 144 198 IPR017887 -
Rops11g00128 471 MobiDBLite consensus disorder prediction 113 155 - -
Rops11g00128 471 Pfam TCP family transcription factor 143 299 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00128 Rops-Chr11 1798334 1800442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00128 141 389 TCP Transcription Factor Family AT1G35560 50.988 6.53e-59 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Rops11g00128 TCP 1.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00128 - - jre:109002313 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00128 11 1798334 1800442 Rops11g00128 11 1798334 1800442 ECH