Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00112 ATGGAGGCCTCAGCTACGGGAACAACAATGAAGGATGAAGATAAAGCAAGTGATGGTATTGAAAATGACAACAAAGATGGAGAAATTACTAGAGATTGTAATTTGCTTGGAAGAGTTGTTCATAATGAAATGGAAGCATTCAAGTTGTACAATGATTATGCCTACTCTGTTGGATTTGGAGTTCGTTGTGGCAAGCAACGTCTTTATGAAAGGACAACACTCATTCGCCAAAAAGAATATGTTTGTCGTAATGAAGGTCAAAAAGGTTCATGGAAGCTTGGAGAGGAGGTTAATAGAAGACTTACAACAAGATGTAATTGCCTTGCAATGATTCGATTTTCGGTTAGCAAAGATGGTTCCATATGGAAGGTTACTAAGCATGTAAAAGAACACTGA 396 0.3763 MEASATGTTMKDEDKASDGIENDNKDGEITRDCNLLGRVVHNEMEAFKLYNDYAYSVGFGVRCGKQRLYERTTLIRQKEYVCRNEGQKGSWKLGEEVNRRLTTRCNCLAMIRFSVSKDGSIWKVTKHVKEH* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00112 131 Pfam FAR1 DNA-binding domain 49 131 IPR004330 -
Rops11g00112 131 MobiDBLite consensus disorder prediction 1 28 - -
Rops11g00112 131 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 14 131 - -
Rops11g00112 131 MobiDBLite consensus disorder prediction 7 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00112 Rops-Chr11 1605018 1605670 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops11g00112 FAR1 1.1e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00112 - - hbr:110645710 92.4337