Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00105 ATGGGGGAGGAGTCGCCCAAGAATAAAGTGAAGTTCCTGTGCAGCCATGGCGGAAAGGTTCTTCCACGACCCTCCGATGGAGTCCTCAAGTATGTCGGCGGTGAGACTCGTGTCATTTGTGTCCCTCGCGACGTTACTTTCTACGAGGTAATGAAGAAGGTGAGTGGGATGGTTGAGGGTGAGGTAGTGCTAAAGTACCAGCTGGTACCTGAAGACCTTGATACTTTGGTGTCTGTGAGGAACGACGAGGATCTGAAGCACATGATAGAGGAGTACGATCGGCATGAGAGTGCAGGAGCCTCATTGCTTCGTGCTTTCCTCTTCCCTTTTACCAAGCCACCACCACCACCATCGCCATCTGGAGCTTATTTATTAGAACAACGTTACATTGATGCCATCAATGGCATCATACGTACAGGTACAAGTACAAGCCCAAGGGCTAAGCAGCCTTGCTCTGCATGTTCTTCCCCAAAATCAATCTCCCCAGATGGTCATACTGCTACTGAATCACCCTTCCCTCCTGCTCGCCTCTCAAATTCATTGCATAAAGTGAGAAGCTCTCCCAGCCTAACCAACCTTAATAACAGCAGCAACAACATTCAACAGCATGATCATAGTCATCATCATCATCACCTCCACCCTTTTGCTTATCCATCACCACCAAGACAAGATGCTCAATTGGGGATGGGAAGGTCGCCCCCAGTGATGACAGATATGGGCAGAGGTGGTGGTGGTGGTGGTGGTGGTTTTAACTATTATTACCCAGCAATAAGCAGACCCCACAAACCCTATGCATATCAAGATGATAACATATATGGTCCCGTTACCTTCGAAAGAGTTCATAGTGTACCTCGGAGTCCTCGAAAGTCTATATGGGAATAG 882 0.483 MGEESPKNKVKFLCSHGGKVLPRPSDGVLKYVGGETRVICVPRDVTFYEVMKKVSGMVEGEVVLKYQLVPEDLDTLVSVRNDEDLKHMIEEYDRHESAGASLLRAFLFPFTKPPPPPSPSGAYLLEQRYIDAINGIIRTGTSTSPRAKQPCSACSSPKSISPDGHTATESPFPPARLSNSLHKVRSSPSLTNLNNSSNNIQQHDHSHHHHHLHPFAYPSPPRQDAQLGMGRSPPVMTDMGRGGGGGGGGFNYYYPAISRPHKPYAYQDDNIYGPVTFERVHSVPRSPRKSIWE* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00105 293 Pfam PB1 domain 29 108 IPR000270 GO:0005515
Rops11g00105 293 SMART PB1_new 24 110 IPR000270 GO:0005515
Rops11g00105 293 MobiDBLite consensus disorder prediction 141 201 - -
Rops11g00105 293 Gene3D - 30 108 - -
Rops11g00105 293 SUPERFAMILY CAD & PB1 domains 25 111 - -
Rops11g00105 293 PANTHER OS05G0427100 PROTEIN-RELATED 4 232 - -
Rops11g00105 293 CDD PB1_UP2 13 108 - -
Rops11g00105 293 MobiDBLite consensus disorder prediction 141 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00105 Rops-Chr11 1519646 1521083 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00105 9 185 MAP Kinase Kinase Kinase AT5G57610 40.909 1.52e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00105 - - tpra:123910761 295.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops11g00105 11 1519646 1521083 Rops11g00105 11 1519646 1521083 ECH