Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00094 ATGGGTTGTATATGCTCCAAAGCAAAATCTGCAAATGAATATGTTGCCGATCACCATCATCACAAAAAGGACAAACAATTGAAGACAAACAGATCCGCAAAGCATTTGGTGACCGAGAATGATGCCACTGCACGCCTTATATCCAACACTCCTCCTCAGGCTGGAAACGAAGGAGCCTCTTCCACTCCCGTTTCCTCGGATGATGGGGACAAGGAAAAGGACAAGAATGGCGCCAAACAACTTGTTCAGATGGGATCAAACGTGGGTTTTGCAGGTGCAGGAGGACAAGGACAACCTAGGATGTCTAGGATATGTAGTGTAACTAGGGGGGAAAGAGGAGCACAGGTTCTTGCTGGCTGGCCTTCTTGGCTCACTGCTGTTGCAGGGGAAGCCATTAGTGGTTGGATACCTCGCAGAGCTGACTCTTTTGAGAAGCTGGATAAGATTGGGCAAGGAACTTACAGCAGTGTTTATAGAGCTCGTGATCTTGAAACAAACAAAATTGTTGCATTGAAGAAGGTTAGATTTGCCAATATGGATCCAGAAAGTGTTCGTTTTATGGCAAGAGAAATTCTTGTGCTGCGAAGGCTTGATCATCCAAATGTCATGAAACTTGAAGGCATGATTACTTCAAGGGTTTCTGGTAGCTTGTATCTTATTTTTGAATATATGGAGCATGACCTTGCAGGGCTTGCAGCAGTACCTGGCATCAAATTTACGGAAGCACAGATCAAGTGTTATACGCAACAGCTTCTTCGTGGTCTTGAGCATTGTCACAGTCGCGGTGTTATGCACCGTGACATCAAGGGTTCAAATCTTCTGCTTGACAATAATGGCAATCTGAAGATTGGTGATTTTGGGCTTGCAACTTTTTTTCAGCCATCTCAAGGGCAGCCTTTAACAAGCCGTGTAGTAACCTTGTGGTACAGACCACCTGAACTTTTACTTGGAGCTACAGATTATGGAGATGCTGTGGATTTGTGGAGTGCTGGTTGTATTCTCGCAGAATTGTTTGCTGGGAAGCCTATAATGCCAGGACGAACAGAGGTGGAGCAACTTCATAAAATTTTCAAACTTTGTGGATCTCCTTCTGAAGAATACTGGAAGAAGTCAAAGCTACCACATGCAACAATTTTCAAACCTCAACAACCTTACAAACGTGTTGTTTCCGAGACATTCAAGGATTTTCCTTCATCAGCACTGAGCCTCTTGGAGGTCCTACTTGCTATAGAACCAAAAGATCGAGAAACTGCATCTTTAGCACTTCAGAATGAGTTCTTCACAGCAAAGCCACTTCCTTGTGATCCGTCAACTTTGCCAAAGTACCCACCAAGTAAGGAGTTTGATGCGAAACTTCGAGAAGAGGAAGCTAGAAGCAGACGGAGAGCAGCAAATAAAGGACATGGACCAGAATCCGTTGGGAGGAATTTTAAGGAGTCTAAAGCTGTGCCAGCACCTGATGCTAATGCGGAGTTTCAGGCATCATTGGAGAAGAGACAAGGGCAGGGTAATTCTAAGTGCATTAGTGAGAAGTACAATCCTGAAGAGGATGGCGGTAATGGCTTCCCTCTTGAACCTACAAAGCCAAGAGCAGTCAATGTATTCTCTCATTCTGGCCAGTCAATGCATCCAAGTGCATATGGATCCTCACGCAATATGAATTTAAAAGTGGAAGATGATCTTGCTGGCCCTGATCATGTCTTTACATCAAGAAACTCTGAGTTGAGAAAACAAAAATCCTACTTGCACGGTAGCACTGCACAATTGTCAAGATTTTCTAATTCAGTTGCAGTTCGAGGTAACTCACGGCTTGATATGAGTGGAGACGGTAGTGAGAATTCACAGTGGCCAGAGGATCACTTTGTGATGAGATATAGTCATCTGGCAGATGGTGAGTCCAACCAATTGCTGGATGGATCCAAGCCTTCACGCAAGAAGGACTTCCATCTACTTGGAAAGGATCGAACCAAGGGCTATGCTCCCAAAAATGGCCACATCCACTATTCCGGACCATTACTGCCTCCAGAGGATAATCTTGAAGAAATGCTAAAGGAGCACGAAAGGAAAATCCAAGAGGCTGTCCGGAAAGCTCGTTTGGACAAGGACAAGGTAAAAAAGACTGACAGCGAGAATGGCCTAACTGAATCCCTATTTCACCCTGTGAGTAATCACAAATGA 2178 0.4454 MGCICSKAKSANEYVADHHHHKKDKQLKTNRSAKHLVTENDATARLISNTPPQAGNEGASSTPVSSDDGDKEKDKNGAKQLVQMGSNVGFAGAGGQGQPRMSRICSVTRGERGAQVLAGWPSWLTAVAGEAISGWIPRRADSFEKLDKIGQGTYSSVYRARDLETNKIVALKKVRFANMDPESVRFMAREILVLRRLDHPNVMKLEGMITSRVSGSLYLIFEYMEHDLAGLAAVPGIKFTEAQIKCYTQQLLRGLEHCHSRGVMHRDIKGSNLLLDNNGNLKIGDFGLATFFQPSQGQPLTSRVVTLWYRPPELLLGATDYGDAVDLWSAGCILAELFAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQPYKRVVSETFKDFPSSALSLLEVLLAIEPKDRETASLALQNEFFTAKPLPCDPSTLPKYPPSKEFDAKLREEEARSRRRAANKGHGPESVGRNFKESKAVPAPDANAEFQASLEKRQGQGNSKCISEKYNPEEDGGNGFPLEPTKPRAVNVFSHSGQSMHPSAYGSSRNMNLKVEDDLAGPDHVFTSRNSELRKQKSYLHGSTAQLSRFSNSVAVRGNSRLDMSGDGSENSQWPEDHFVMRYSHLADGESNQLLDGSKPSRKKDFHLLGKDRTKGYAPKNGHIHYSGPLLPPEDNLEEMLKEHERKIQEAVRKARLDKDKVKKTDSENGLTESLFHPVSNHK* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00094 725 MobiDBLite consensus disorder prediction 694 725 - -
Rops11g00094 725 MobiDBLite consensus disorder prediction 446 475 - -
Rops11g00094 725 MobiDBLite consensus disorder prediction 10 75 - -
Rops11g00094 725 SUPERFAMILY Protein kinase-like (PK-like) 137 434 IPR011009 -
Rops11g00094 725 ProSiteProfiles Protein kinase domain profile. 143 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00094 725 MobiDBLite consensus disorder prediction 496 527 - -
Rops11g00094 725 MobiDBLite consensus disorder prediction 654 674 - -
Rops11g00094 725 MobiDBLite consensus disorder prediction 42 65 - -
Rops11g00094 725 MobiDBLite consensus disorder prediction 694 712 - -
Rops11g00094 725 FunFam probable serine/threonine-protein kinase At1g54610 226 467 - -
Rops11g00094 725 FunFam probable serine/threonine-protein kinase At1g54610 130 225 - -
Rops11g00094 725 SMART serkin_6 143 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops11g00094 725 Gene3D Phosphorylase Kinase; domain 1 138 230 - -
Rops11g00094 725 PANTHER CELL DIVISION PROTEIN KINASE 141 433 - -
Rops11g00094 725 ProSitePatterns Protein kinases ATP-binding region signature. 149 172 IPR017441 GO:0005524
Rops11g00094 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Rops11g00094 725 Gene3D Transferase(Phosphotransferase) domain 1 231 466 - -
Rops11g00094 725 CDD STKc_CDK9_like 143 427 - -
Rops11g00094 725 Coils Coil 676 703 - -
Rops11g00094 725 MobiDBLite consensus disorder prediction 433 484 - -
Rops11g00094 725 Pfam Protein kinase domain 143 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00094 Rops-Chr11 1429182 1429817 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00094 135 466 Core Cell Cycle Gene Families AT5G10270 50.720 1.39e-116 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Rops11g00094 Pkinase 5.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00094 - - gmx:100805055 1077.77