Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00032 ATGGCTGAGCATCACAGCTCCGAAGCTCCCTCAGAAGGAGCCCCACAGCTTCGCTGGAAATGGAAGGATTCAGAAGGAGACGACGGAAACCATGAAGAAGAAGAAGAAACGGAGGAGATAGAGGAACAAGTCGGTGAATCGCCGCTCGCCAACGAGTCGCAACGTGGAGAGTTACGGAGTTCCGGTGAATCTCCGACGGAGTCAAATTCAGAAACCCTAGCTGATGTTCCATCTTCGGTTGTGCAGCATCGGAGTACCGATTTACAGGGGAACGCTGCTACGCTGAATTCCGATGGCAAAGCCGAAAGTAAGGAGACAGTTGGACCTCCTGAGAAGGAAATTATTGCGAGGAAGCAGCCCAGGCACCTCCAACTCAGACAGAAAATCAGCTTCAGGACATCAGCATCTGATGGATACAACTGGCGGAAGTATGGTCAGAAGCAAGTGAAGAGTCCTACAGGTCATGTGACAGAGATTGTTTATAAAAGTGAACACAGTCACGATCCCCCACAGAAGACTAATTCCATTAGGGAAAGTAAGTTTGTGTCTTCCAATGAACCTACTGTAGATAACAGTGTTCTGGAGCAGGCTATCATAGTTCTGAAGGATTCTGATCCGTCCATTTCTTCAAAAGCTCAACAAGAAGCACCTTGCAGCGCTGATAGAAAACGGAAAAACTCGTCTAATGTCAGTGAGAATGATAAAGTTATTTTGAAGGAGGAACGTGTAGATGAACCAGAGCCGAAAAGAAGAATGAAGAAAGGTGACTTAACGTGTTTGGATTCTCCTGTAAAATCTGGAAAGAAATCCAAGTTTGTCGTACATGCAGCAGGGGATGTGGGGATATCAGGTGATGGATACCGATGGCGCAAGTATGGACAGAAAATGGTGAAGGGGAATCCACATCCCAGAAACTACTACAGATGCACTTCTGCTGGATGTCCTGTCCGAAAGCACATTGAGACTGCTGTAGATAACTCAAATGCTGTCATCATAACATACAAGGGTGTACATGACCATGACATGCCTGTGCCCAAGAAACGACATGGCCCACTGAGTGCTCCTCTTGTGGCTGCTGCAGCACCTGCCTCCATGTTGAAGAAACCCGACTTGCCGCAAAACCAGAAAATTTCTACTCAACGGTCAGTGCACACCGAAGGAGAGCTAACTGGGGAAGCCATGGAACTTGGGGGTGAGAAAGCAATGGAGTCAGCTCGAACGCTTCTGAGCATAGGTTTTGAAATTAAGCCTTGCTGA 1257 0.4749 MAEHHSSEAPSEGAPQLRWKWKDSEGDDGNHEEEEETEEIEEQVGESPLANESQRGELRSSGESPTESNSETLADVPSSVVQHRSTDLQGNAATLNSDGKAESKETVGPPEKEIIARKQPRHLQLRQKISFRTSASDGYNWRKYGQKQVKSPTGHVTEIVYKSEHSHDPPQKTNSIRESKFVSSNEPTVDNSVLEQAIIVLKDSDPSISSKAQQEAPCSADRKRKNSSNVSENDKVILKEERVDEPEPKRRMKKGDLTCLDSPVKSGKKSKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNSNAVIITYKGVHDHDMPVPKKRHGPLSAPLVAAAAPASMLKKPDLPQNQKISTQRSVHTEGELTGEAMELGGEKAMESARTLLSIGFEIKPC* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00032 418 Gene3D WRKY domain 267 344 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops11g00032 418 FunFam WRKY transcription factor 268 344 - -
Rops11g00032 418 SUPERFAMILY WRKY DNA-binding domain 133 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops11g00032 418 Gene3D WRKY domain 124 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops11g00032 418 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 28 150 IPR044810 GO:0003700
Rops11g00032 418 MobiDBLite consensus disorder prediction 47 101 - -
Rops11g00032 418 MobiDBLite consensus disorder prediction 1 122 - -
Rops11g00032 418 MobiDBLite consensus disorder prediction 161 188 - -
Rops11g00032 418 ProSiteProfiles WRKY domain profile. 278 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops11g00032 418 MobiDBLite consensus disorder prediction 208 254 - -
Rops11g00032 418 MobiDBLite consensus disorder prediction 28 45 - -
Rops11g00032 418 MobiDBLite consensus disorder prediction 104 120 - -
Rops11g00032 418 Pfam WRKY DNA -binding domain 285 340 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops11g00032 418 MobiDBLite consensus disorder prediction 217 254 - -
Rops11g00032 418 SUPERFAMILY WRKY DNA-binding domain 279 343 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops11g00032 418 SMART WRKY_cls 135 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops11g00032 418 SMART WRKY_cls 283 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00032 Rops-Chr11 279353 287115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00032 132 418 WRKY Transcription Factor Family AT4G30935 58.413 1.31e-110 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops11g00032 WRKY 1.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00032 - - gmx:100782194 482.641