Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00004 ATGGCGACAAAGGAAGGCAAAGCCATTGGCATAGACCTTGGCACCACCTACAGCTGTGTAGGGGTGTGGCAAAACGACCGTGTTGAGATCATTCCCAACGATCAAGGAAACCGAACCACCCCATCCTACGTTGCCTTCACCGACACAGAGAGGCTGATCGGAGATGCCGCCAAGAACCAGGGTGGTGCTGGTGGAGACGTGCCTATGGGTGATGACATGCCTGCTGGTGACTCTACCGGATCGGGTTCGGGTGCTGGACCTAAGATTGAAGAAGTTGATTGA 282 0.5461 MATKEGKAIGIDLGTTYSCVGVWQNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQGGAGGDVPMGDDMPAGDSTGSGSGAGPKIEEVD* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00004 93 ProSitePatterns Heat shock hsp70 proteins family signature 1. 11 18 IPR018181 -
Rops11g00004 93 Pfam Hsp70 protein 8 60 IPR013126 GO:0005524|GO:0140662
Rops11g00004 93 Gene3D - 1 63 - -
Rops11g00004 93 PANTHER HEAT SHOCK PROTEIN 70KDA 8 60 IPR013126 GO:0005524|GO:0140662
Rops11g00004 93 MobiDBLite consensus disorder prediction 55 93 - -
Rops11g00004 93 SUPERFAMILY Actin-like ATPase domain 7 62 IPR043129 -
Rops11g00004 93 FunFam heat shock 70 kDa protein-like 2 67 - -
Rops11g00004 93 PRINTS 70kDa heat shock protein signature 35 47 - -
Rops11g00004 93 PRINTS 70kDa heat shock protein signature 7 20 - -
Rops11g00004 93 PRINTS 70kDa heat shock protein signature 57 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00004 Rops-Chr11 45490 47550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00004 1 60 Calmodulin-binding Proteins AT1G16030 95.000 1.11e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00004 K03283 - gmx:100782173 126.331