Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops11g00003 ATGCAGCAAGGTGATCAAACGGTTCTGAGCTTGAGGCCTGGTGGTGGTAGAGGAAGCAGGCTCCTCGCTCCTCGATTCGATTCCTCTTCATCTACTTCTTCTGCTATTGGCTCTGATCTTCCTCTCTTGCGTCCCCATGGCGCCGCTGCTACTCCCTTCTCTATCAAGGCTGGAGATTCACGATTTGAGGGTCGTGAGCGTGTGCGGTATACCAGAGATCAGCTCTTACAACTCAGAGAGGTGGTTGAGACCTTTGATGATATTTTAAAAATCAAACAAGATATTGAAGCTGAACTTTTTGGTGAAGATCAAAGTTGGGGCCGCTCAGAAAACAATCCCCAGCATCAAATTCAAAATCGATATTCTGAGCCAGATAACCGTGACTGGCGTGGCCGATCTGGGCAACTTCCTGCTAATGCAGACGAGAGGTCTTGGGATAATCTCAAGGAGAATAGAGAATTTGGATATACTAGTCAGGTTAATCGTCAAGACCAACTAAATTCTCAGTTTGCAAGGGCACAAATCTCTTCTAACCAAGGGGGAGGACCTACTCCTACTCTAGTCAAGGCTGAGGTACCATGGTCAGCTAGAAGGGGAAGTCTCTCTGAAAAAGATCGTGTCTTGAAGACTGTTAAAGGAATACTGAATAAGTTGACTCCTGAGAAATTTGATCTCCTGAAGGGTCAGTTGATTGATGCTGGCATTACATCAGCTGACATATTGAAAGTGTTAGAACCAACATTTTGCCCCATGTATGCTCAGCTGTGTTCTGATCTTAATGAAAAGCTGCCTCCTTTCCCATCTGAAGAACCTGGTGGGAAAGAAATAACTTTCAAGCGAGTACTCTTGAATATTTGCCAGGAGGCTTTTGAAGGTGCAGATAAACTGAGGGAAGAATTAAGGCAGATGACTGCCCCTGAGCAGGAGATGGAGCGAAATGACAAGGAAAGGCTTGTCAAGATTCGTACCCTTGGAAACATCCGTTTAATTGGTGAGCTGTTGAAGCAAAAAATGGTTCCTGAAAAGATTGTCCATCACATTGTCCAGGAGCTTTTAGGACCTCCTGACAGCAAGGTCTGTCCAGCTGAGGAAAATGTTGAAGCCATATGTCAATTTTTCAACACTATTGGTAAGCAGCTTGATGAAAGCCCAAAATCACGAGCGCATAAATGA 1173 0.4484 MQQGDQTVLSLRPGGGRGSRLLAPRFDSSSSTSSAIGSDLPLLRPHGAAATPFSIKAGDSRFEGRERVRYTRDQLLQLREVVETFDDILKIKQDIEAELFGEDQSWGRSENNPQHQIQNRYSEPDNRDWRGRSGQLPANADERSWDNLKENREFGYTSQVNRQDQLNSQFARAQISSNQGGGPTPTLVKAEVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDAGITSADILKVLEPTFCPMYAQLCSDLNEKLPPFPSEEPGGKEITFKRVLLNICQEAFEGADKLREELRQMTAPEQEMERNDKERLVKIRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDSKVCPAEENVEAICQFFNTIGKQLDESPKSRAHK* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops11g00003 390 MobiDBLite consensus disorder prediction 105 120 - -
Rops11g00003 390 SUPERFAMILY ARM repeat 202 387 IPR016024 -
Rops11g00003 390 MobiDBLite consensus disorder prediction 104 142 - -
Rops11g00003 390 Pfam MIF4G domain 208 387 IPR003890 GO:0003723|GO:0005515
Rops11g00003 390 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 51 389 IPR045208 GO:0003743
Rops11g00003 390 MobiDBLite consensus disorder prediction 1 39 - -
Rops11g00003 390 SMART if4_15 208 390 IPR003890 GO:0003723|GO:0005515
Rops11g00003 390 Gene3D - 199 390 - -
Rops11g00003 390 MobiDBLite consensus disorder prediction 24 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops11g00003 Rops-Chr11 28998 33274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops11g00003 1 387 Eukaryotic Initiation Factors Gene Family AT5G57870 69.576 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops11g00003 K03260 - gmx:100781275 682.559