Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02721 ATGCGTAGGCCAACAATGAAGCAATCCGTGAGCGACCTGAACCTGTCAAAGACTCACACTTCACCCACTCGCCACCACTATCGATCTGCAAAAATTGTGCGAAGGAGAAAAAACAGTGGTGGTACCTTGTCACCGGTGAAGCTGGACCCATATGACATGATCATTCACGAGTCCTCCAACAGTCCATACTACCAGGGTCTCACTGATCAATCCCTTGCTATCTTGGATGCACCACCACCTCACACTCCTACCACTTACTTCCTTTCATCTGCTCATAGTCCTTACTACAAAGGTCTTACCGATTATTCCCTTGCTATTGGTCCTCCCATCCATGCACCTCCACATCCCATCAACTCCCTTTCATCACACGAGTCTAGTAGTCCTTACTATAGCGGTCTCATTGATTACTCCCTTGCACTTCATGGACCATCACCACCACCCATCAACAGCGCCTTTTGCATCAGATTCACTGCACCATCATCACCGCCCAATGAGTTGATGGTCGATGCTGATGATGGCTTTCTAATTGAACAGAAGCCTAACCCTTTGAGGGACAAAGAAAATGCAGAAGAGGAGATGGAGATGGAGATGGAGATTGAAGAGAAGCCATTGAGGGAGAGAGTATCAGAAGAAGCATGTGATGCACAAGAAGAGAAAACAATTCTGGAGATGGATCAAGGGAAGGAGGAGGAAGTCAAAGACAATGGTGAATCATCTGCTTCTGAACAAACACAAGTAGCATGTAGAGAGGGAGGAAATCATGGCCAGCAACAGGAGTTGGCTGAGGAAGGAAAAGTGGTCGAGTATGTATGGGCAACCAAATACCAGCCCATGACCCTGGCAGACTTCATCTGCAACAGAGATAAAGCGCTTCACCTCAAACAATTGGTAAAAGAGGGGTGTGGCTGTGATAATTTTATATTTGAAGGACCACCAAGTGCAGGAAAGAGATGCATGATTCGGGCTATGCTTCGAGAGGTGTTTGGCGCTGACAGAGTGCAGATCATAGAAGAATGTAAAGAATTCAAGTTGAAGGGAGAAATGGTTGACAAAGTGCGCATAAAGAAATCACTCCACCATGTTGAGGTCAATCTGTCTGAGACAAAGGGATATGAGAAGCATGTGATTATTGAATTATTCAAGGAAACATATAGTAATAACTCACTGCCTTGTAGCCCAGAAAATTGCCAAGCGATCATTTTGTATGAGGCCGAGAAGTTATCGCTAGAATCCTTGTTATATATCAAGTGGCTACTAGAAAAGTATAAAGGGTGTTGTAGTAAGGTGTTCTTTTGTTGCTCTGATGAATCAAGGCTTCAACCTGTCAAATCCATTTGCACCACCGTCCGACTTTCATCACCATCATCCGATGAGATTGTTAAGATTTTGGAATATATTGGAAAAGAAGAAGGAATAAAATTATCACGCGACATATTGGAGAAGATAATTTTGAGGTCCAAAAACAATCTCCGCCAAGCCATTCGTTCATTGGAGGCCACTTGCCGAAACAAGGATACCCTGAACGACGACGATTTGATTTTAACAGGATGGGAGGATGATGTTTTGAATATTGCTAAAAATATAATCGAAGAGCAAAGTCCAAGACAGTTGTACGTCATTCGTAGAAAGCTTCAAAGTCTTATGATCCATGATGTTCCTCCTGACTTCATTTATAAGTCTTTAGTTGCAGAGTTAACGATTCTCGTTGATGACTCGCTGCGGCCTGGTGTTGCCAAACTGGACAAGGAGTACAACAGAGCTAGTGAAATCAAATTTGAAACAGTGAAGCAATTTGGTCATGCGCAAAACAAACAAGGGGGATCGGATGAAAAGAACAATGAGCCAACAAAAACAAATGGATTAAACTACTCAAAAATTGAAGAATTTATAGCAAAATTCATGAGCTGGTACAAGAATTCATCTGAAAAAGACAGTCATGTGCAACTTGTTGCTGGAACATAG 1962 0.4286 MRRPTMKQSVSDLNLSKTHTSPTRHHYRSAKIVRRRKNSGGTLSPVKLDPYDMIIHESSNSPYYQGLTDQSLAILDAPPPHTPTTYFLSSAHSPYYKGLTDYSLAIGPPIHAPPHPINSLSSHESSSPYYSGLIDYSLALHGPSPPPINSAFCIRFTAPSSPPNELMVDADDGFLIEQKPNPLRDKENAEEEMEMEMEIEEKPLRERVSEEACDAQEEKTILEMDQGKEEEVKDNGESSASEQTQVACREGGNHGQQQELAEEGKVVEYVWATKYQPMTLADFICNRDKALHLKQLVKEGCGCDNFIFEGPPSAGKRCMIRAMLREVFGADRVQIIEECKEFKLKGEMVDKVRIKKSLHHVEVNLSETKGYEKHVIIELFKETYSNNSLPCSPENCQAIILYEAEKLSLESLLYIKWLLEKYKGCCSKVFFCCSDESRLQPVKSICTTVRLSSPSSDEIVKILEYIGKEEGIKLSRDILEKIILRSKNNLRQAIRSLEATCRNKDTLNDDDLILTGWEDDVLNIAKNIIEEQSPRQLYVIRRKLQSLMIHDVPPDFIYKSLVAELTILVDDSLRPGVAKLDKEYNRASEIKFETVKQFGHAQNKQGGSDEKNNEPTKTNGLNYSKIEEFIAKFMSWYKNSSEKDSHVQLVAGT* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02721 653 MobiDBLite consensus disorder prediction 224 259 - -
Rops10g02721 653 MobiDBLite consensus disorder prediction 238 252 - -
Rops10g02721 653 MobiDBLite consensus disorder prediction 21 35 - -
Rops10g02721 653 SUPERFAMILY post-AAA+ oligomerization domain-like 516 584 IPR008921 GO:0003677|GO:0006260
Rops10g02721 653 FunFam replication factor C subunit 3 455 513 - -
Rops10g02721 653 MobiDBLite consensus disorder prediction 1 44 - -
Rops10g02721 653 Gene3D - 269 454 IPR027417 -
Rops10g02721 653 Gene3D - 516 637 - -
Rops10g02721 653 MobiDBLite consensus disorder prediction 600 620 - -
Rops10g02721 653 CDD HLD_clamp_RFC 454 512 - -
Rops10g02721 653 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 271 597 - -
Rops10g02721 653 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 268 512 IPR027417 -
Rops10g02721 653 Gene3D - 455 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02721 Rops-Chr10 47064016 47071153 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02721 270 639 Core DNA Replication Machinery Family AT5G27740 30.504 1.98e-48 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02721 K10756 - gmx:102664389 721.85