Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02702 ATGCTAGTTGAGAGGAGATGTGTTTTGGTGGGAATTAGAATTGATAACCATAGCAGACAACTGCTCAACTGGGCTCTAGTCAAAGTTGCCGAACCTGGGGATCGTGTTATTGCAGTCCATGTAGTTAGAAGTCCAGATTATGTTTCCGAAAGCAAGTCCTCGGTAGATGATTATTTAGAGGCTTATGAAGGGTTATGCGATGTGAAAAAGGTAGGTCTCTACGGTCAGATCTTGACAGGAAGTTCCATTCGAGACGTTCTTGTCAGAGAGGCGAAAAACCGTGCTGCTGTGGCTTTAGTGGTGGGGGGTCGAGCTTCCACAGCTAAATATTGCGCCAAACGACTACCACCCTCCACCAATGTTCTCGCTATCCAAGGTGCAAGAATTGTCTTCAGAAGACGCAACACTGACAAACAACTAACAGGTGGTCTCATAGAGGATCCAAGACCAAGTCTTACTAACACAGCGATCCAGTCTGAATTTGGTTACTCCGTGGTGGAGAGTGAGAAATCAACATGCAAAGATATCAGAGAATTGGAGGAAGAAGGATTTACAGGAAAACAAAGGTGCAAGAAAGTCTCTTCAAGATCAACATCTCAGTTTGCAGGTGACCCCGCGGAGCAGAGGCTTGGGTGGCCACTTCTCCGCAGGAACTATATACAAATCTCAGAGAGCCCCTATGCAAGGGACATGTCTGTAGTGCAATGGGTTAATAATACATTCAATTGCAAGTGGTTCAGCCTAGAAGTTCTTAAGTCTTGCACTTGTCAATTTTCTTCAGAAAATCTTATCGGGGAAGGAGGGAGCAATCATGTGTACAAAGGAATCCTCCCTGATGGGAAGCCCGTCGCAGTCAAAGTCTTGAAGTCATCAAAAGAAGCCTTAAAAGATTTTGTTCGTGAGGTGGAAATAATATCCTCATTGAAGCACAAAGGCATCACTCCTCTACTTGGGATTTGCATTGAGGACAGTGCTTTGATCTCTGTTTATGATTATTTCCCCAAAGGAAGCCTAGAGGAAAGTCTACATGGTACAGATTTAGTGGAATTTTTGTTGACTTTTCACCTATCATTAAAATTACTCGAAAATGGATATGATACTGATATGAAATTGGAAATGGATATAGGCAAGAACAAGAATGGATCTTTCTTGTCATGGGAAGTAAGATTTAATGTAGCTATTGGGATTGCTAAAGCACTCAATTACCTACACAATGAAACTTCGAAGCCTATTATACACAGAGATGTCAAGTCTTCCAACATTCTTCTTTCCCATGGGTTTGAGCCACAATTATCTGATTTTGGGCTTGCCATGTGGGGACCAACAACTTCATCTTTTCTGATACAAGACGACTTAGTTGGAACATTTGGTTATCTTGCACCTGAATACTTCATGTATGGAATGGTAAGTGACAAGATAGACGTCTATGCTTTTGGTGTAGTACTGCTTGAACTAATCTCAGGAAGGGAACCATTCAGCTCAAAAACTAGCAACGGACAGGAGAGTTTGGTCGTGTGGGCAAAACCATTGTTAGAGAGTGGGAATGTTAAAAGCTTATTGGATCCAAATTTGCAAGGCGAGTTTGACGTGGCCCAAATGCAAAATATGGTTCTGGCAGCATCTCTTTGCATTACTAGGGCTGCACGGCTTCGTCCTACATTGAATCAGATACTGAAGATCTTAAAAGGGTATGATGAGAAAGTTGAAAACTTTTTTAGCTCCCACGAGAATGATCAAGACCATTTGGAAAATCAAGAAAATATTGATGACGAGGTCTATCCAAATTCAAGTGCAGAGTTACACCTGAACCTTGCATTACTCGATGTTGACAATGACTCTACCTCATATAGAAGTGGTATAGAGCATATCTATAGTGAACTTTAG 1884 0.4183 MLVERRCVLVGIRIDNHSRQLLNWALVKVAEPGDRVIAVHVVRSPDYVSESKSSVDDYLEAYEGLCDVKKVGLYGQILTGSSIRDVLVREAKNRAAVALVVGGRASTAKYCAKRLPPSTNVLAIQGARIVFRRRNTDKQLTGGLIEDPRPSLTNTAIQSEFGYSVVESEKSTCKDIRELEEEGFTGKQRCKKVSSRSTSQFAGDPAEQRLGWPLLRRNYIQISESPYARDMSVVQWVNNTFNCKWFSLEVLKSCTCQFSSENLIGEGGSNHVYKGILPDGKPVAVKVLKSSKEALKDFVREVEIISSLKHKGITPLLGICIEDSALISVYDYFPKGSLEESLHGTDLVEFLLTFHLSLKLLENGYDTDMKLEMDIGKNKNGSFLSWEVRFNVAIGIAKALNYLHNETSKPIIHRDVKSSNILLSHGFEPQLSDFGLAMWGPTTSSFLIQDDLVGTFGYLAPEYFMYGMVSDKIDVYAFGVVLLELISGREPFSSKTSNGQESLVVWAKPLLESGNVKSLLDPNLQGEFDVAQMQNMVLAASLCITRAARLRPTLNQILKILKGYDEKVENFFSSHENDQDHLENQENIDDEVYPNSSAELHLNLALLDVDNDSTSYRSGIEHIYSEL* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02702 627 SUPERFAMILY Protein kinase-like (PK-like) 234 561 IPR011009 -
Rops10g02702 627 FunFam Putative receptor-like serine/threonine-protein kinase 368 578 - -
Rops10g02702 627 Gene3D Transferase(Phosphotransferase) domain 1 371 591 - -
Rops10g02702 627 CDD USP_Like 8 116 - -
Rops10g02702 627 Gene3D Phosphorylase Kinase; domain 1 221 332 - -
Rops10g02702 627 Pfam Protein kinase domain 259 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g02702 627 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 8 116 - -
Rops10g02702 627 Gene3D HUPs 3 115 IPR014729 -
Rops10g02702 627 PANTHER OS08G0249100 PROTEIN 187 585 IPR046958 -
Rops10g02702 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Rops10g02702 627 ProSiteProfiles Protein kinase domain profile. 258 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g02702 627 SMART serkin_6 258 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g02702 627 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 232 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02702 Rops-Chr10 46827393 46833786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02702 245 569 Trihelix Transcription Factor Family AT5G38560 38.671 1.53e-65 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Rops10g02702 Pkinase 4.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02702 - - tpra:123897148 778.089