Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02662 ATGGGTATTCGTCTGCCATCTATGGTTATTCATGCTAACAAGATATTCAAGTCACAACATCTCCACAGTAGAAATCATTCAAAAGTTCCAAAAGGGCATATAGCAGTGTATGTTGGAGAGGCTCAAAAGAAGAGGTTTGTGGTTCCGATATCTTACTTGAACCATCCTTCATTTCTTGATTTGCTAAACAGAGCTGAGGAAGAGTTTGGCTTCAACCATCCAATGGGTGGCCTCACTATCCCTTGCAAAGAAGAGGCATTTGTCAATCTTACTTCTCAACTGCGTGGCTCATGA 294 0.415 MGIRLPSMVIHANKIFKSQHLHSRNHSKVPKGHIAVYVGEAQKKRFVVPISYLNHPSFLDLLNRAEEEFGFNHPMGGLTIPCKEEAFVNLTSQLRGS* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02662 97 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 14 94 IPR003676 GO:0009733
Rops10g02662 97 Pfam Auxin responsive protein 13 92 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02662 Rops-Chr10 46036684 46036977 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02662 29 87 Calmodulin-binding Proteins AT5G20810 57.627 1.52e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02662 K14488 - gmx:102663761 175.637