Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02660 ATGGGTTTTCGTTTGCCTGGTCTTCAAAGGCGCACTGATGTCCCAAAGGGTCATCTTGCAGTTTATGTGGGAGAAAACCAAAAGAAGCGGTTTGTGATTCCTATATCATTCTTGAATGAACTTACAATTCAAGAATTGCTGAGCCAAGCTGAACAAGAATTCGGATTTCATCATCCAATGGGTGGCCTCACAATCCATTGTAGAGAAGATTTCTTCCTAGATATCACTTCTAGCTTGCAAAGACCATAG 249 0.4137 MGFRLPGLQRRTDVPKGHLAVYVGENQKKRFVIPISFLNELTIQELLSQAEQEFGFHHPMGGLTIHCREDFFLDITSSLQRP* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02660 82 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 11 79 IPR003676 GO:0009733
Rops10g02660 82 Pfam Auxin responsive protein 10 79 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02660 Rops-Chr10 46027567 46027815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02660 12 81 Calmodulin-binding Proteins AT4G34750 44.286 7.26e-14 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02660 K14488 - gmx:112997797 137.502