Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02658 ATGGGTTTCCGTTTACCTGGTATTAGACGAGCATCACTATCTTCAACCCAGACACCATCCAAGGGGATTGAAGTTCCCAAAGGCTACCTTGCAGTCTATGTTGGTGATAACATGAGGAGGTTCGTGATTCCTATATCGTTCTTGAATCAACCTTCATTTCAAGATTTACTGAGTCAAGCAGAAGAAGAATTTGGATATTGTCATCCAACGGGTGGTCTCACAATTCCATGCAGGGAGGATGAGTTCCTAAACCTCACTTCTCGCTTGCATGGGCTATAA 279 0.4373 MGFRLPGIRRASLSSTQTPSKGIEVPKGYLAVYVGDNMRRFVIPISFLNQPSFQDLLSQAEEEFGYCHPTGGLTIPCREDEFLNLTSRLHGL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02658 92 Pfam Auxin responsive protein 14 88 IPR003676 GO:0009733
Rops10g02658 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 22 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02658 Rops-Chr10 46020774 46021052 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02658 14 82 Calmodulin-binding Proteins AT3G43120 52.174 1.27e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02658 - K14488 gmx:100786095 150.599