Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02657 ATGAAAGAAGTTGAACCAGTACTTGTGCGTCTCCAGCAGCGGTCTGACACCGGAGGTGACGGCGACAACGGTGGTGATGCTACTGGAGGCGATGGTGGTGGTACTACTGGAGGCGGTGGTGAGGGAGGCGTGGTGGAGGCAGGCTCAAGTCAAGCATCTAGCAAGGAAGTGGAAGTCCCAAAAGGCTATCTTGCAGTGTATGTTGGAGAGAAAATGAAGAGGTTCTTGATTCCCGTGTCATTCTTGAACGAGCCTTTATTTCAAGAACTGCTTAGCCAAGCTGAAGAGGAGTTCGGTTACCATCATCCGATGGGGGGTCTCACAATCCCTTGCAAGGAAGATGCGTTCTTAGATTTAGCTTCTCGCTTGAACCGGTTGTAA 381 0.5092 MKEVEPVLVRLQQRSDTGGDGDNGGDATGGDGGGTTGGGGEGGVVEAGSSQASSKEVEVPKGYLAVYVGEKMKRFLIPVSFLNEPLFQELLSQAEEEFGYHHPMGGLTIPCKEDAFLDLASRLNRL* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02657 126 Pfam Auxin responsive protein 50 122 IPR003676 GO:0009733
Rops10g02657 126 MobiDBLite consensus disorder prediction 1 55 - -
Rops10g02657 126 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 52 123 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02657 Rops-Chr10 45985066 45990742 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02657 46 116 Calmodulin-binding Proteins AT3G43120 50.704 4.75e-20 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02657 K14488 - gmx:100500615 140.198