Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02655 ATGGGTTTTCGCTTACCTGGTATCAGACGATCACCATTTAGCGGAAGCCAAGCATCTTCCAAGGTAGTGGAAGTCCAAAAAGGCTATCTTGCAGTGTACATTGGAGAAAAAATGAAGAGGTTCTTGATTCCCATATCATTCTTGAACGAGCCTTTATTTCAAGAATTTCTTTGTCAAGCTGAAGAAGAGTTTGATTACTGTTATCCTATGGGGGGTCTCACAATTCCCTGCAAGGAAGATGTGTTCTTAGATGTAACTTCTCGCTTGAATAGGCTATAA 279 0.405 MGFRLPGIRRSPFSGSQASSKVVEVQKGYLAVYIGEKMKRFLIPISFLNEPLFQEFLCQAEEEFDYCYPMGGLTIPCKEDVFLDVTSRLNRL* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02655 92 Pfam Auxin responsive protein 17 88 IPR003676 GO:0009733
Rops10g02655 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 19 89 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02655 Rops-Chr10 45959401 45959679 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02655 15 91 Calmodulin-binding Proteins AT4G34750 36.364 1.45e-14 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02655 K14488 - gmx:100500615 157.918