Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02654 ATGACTATTCGTTTGGCTAGTGCCTTGAGTGCTAAACACATTATTCGCCGATCTAATCTGTTTTCAAATCAAGCAGCTGCAACATCACTGGGTGTGCCAAAAGGGTACTTTGCTGTGTATGTAGGAGAGGGTGAAAAGAAAAGATATGTGATACCAGTGACATTGTTGAATCAGCCCTCATTTCAAGAACTGCTAAGTATAGCTGAGGAAGAATTTGGCTTCAGTCATCCAATGGGTGGCCTCACAATTCCCTGCACAGAGGACATTTTTTTTAAAATCACCTCTGGCTTACACAGATTATGA 303 0.4158 MTIRLASALSAKHIIRRSNLFSNQAAATSLGVPKGYFAVYVGEGEKKRYVIPVTLLNQPSFQELLSIAEEEFGFSHPMGGLTIPCTEDIFFKITSGLHRL* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02654 100 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 13 96 IPR003676 GO:0009733
Rops10g02654 100 Pfam Auxin responsive protein 16 94 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02654 Rops-Chr10 45956048 45956564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02654 24 90 Calmodulin-binding Proteins AT3G43120 49.254 3.53e-14 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02654 K14488 - aprc:113865304 174.866