Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02650 ATGTCGCCGGCAACGGGAAAATGCAGCAAGATCGGGAACATTGTCCGGGCGAGGCAAATGCTACAGCGGTGGCGCAAGAAATCGTGCGCAAAGGCGCCGTTGGATGTCCCGGCGGGACACGTGGCTGTGTGTGTGGGCCCGAGCAGCACGAGGTTCGTTGTGCGCGCGACTTACCTGAACCACCCGATCTTCAAGAAACTTCTGGTGGAAGCGGAAGAAGAGTATGGGTTCTGCAACAAAGGCCCTTTAACGATCCCATGCGATGAGTCACTCTTCCAAGACCTCCTCCGTGTTATGTCTCGCTCCGAGTCGACTCGGTTCGAAGATTTCAGGGGGCGTTGCCACGTGGATGTCCCAAGTTTTTTTGATGAATCCAGGCCCTTGCTTCATGACAACCCTATTTGCTGA 408 0.5539 MSPATGKCSKIGNIVRARQMLQRWRKKSCAKAPLDVPAGHVAVCVGPSSTRFVVRATYLNHPIFKKLLVEAEEEYGFCNKGPLTIPCDESLFQDLLRVMSRSESTRFEDFRGRCHVDVPSFFDESRPLLHDNPIC* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02650 135 Pfam Auxin responsive protein 18 98 IPR003676 GO:0009733
Rops10g02650 135 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 95 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02650 Rops-Chr10 45919366 45919773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02650 6 129 Calmodulin-binding Proteins AT4G34750 52.857 8.98e-44 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02650 K14488 - jre:108986945 189.504