Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02648 ATGGCTGCTCCAAATTTGTCTACCCTCTCTTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCTCTCCCTCTCCAAATCCAAACCTTGCTCTCTCCCTGTCAACACATCAACCACCAACACATGTTTTTTCCACAACAAAACCCTCCCAAACCCCACCTTGTTTTCCAAAACACCTCTTTCTCACTCCCACAACAAGACCCTCTTCTCAGCTTCATGCAAAAACCCAAACAACACATTCCCAGAAGAAGCTTTCTTCAACGATGATGAAAAGCCCCGTGAAGAGTGTGGTGTGGTGGGCATATACGGTGATCCAGAAGCATCTCGTTTATGCTATCTCGCCCTTCACGCCCTCCAACACCGTGGCCAAGAAGGTGCTGGAATTGTTGCAGTGCATAACGATGTTCTTCAATCGGTAACTGGTGTTGGGCTTGTTTCTGATGTGTTCAATGAGTCCAAGCTTGATCAGTTACCTGGAACTTTGGCTATTGGCCATGTTCGTTACTCAACCGCAGGCCAATCCATGTTAAAAAATGTTCAACCTTTCGTTGCAGGGTATCGCTTTGGCTCTGTTGGGGTTGCTCATAATGGAAATTTGGTTAATTATCGTACCTTGAGGGCCAAACTTGAAGACAGTGGGTCCATTTTTAACACCACTTCTGATACTGAGGTTGTGCTTCATCTTATTGCCACCTCAAAGCACAGGCCTTTTATATTGAGGATTGTTGATGCCTGTGAGAAGCTTCAAGGGGCTTATTCTTTTGTGTTTGTTACCGAGGATAAGCTTGTTGCAGTGAGGGATCCCTTTGGGTTTAGACCTTTGGTTATGGGGAGGAGAAGTAATGGTGCTGTTGTTTTTGCCTCTGAGACATGTGCTCTTGACTTGATTGAGGCCACATATGAGAGGGAGGTGTACCCTGGTGAAGTTTTGGTGGTGGACCAGAATGGGGTTCAATCCCTTTGCCTTATGCCTCATCCACAGCCAAAGCAATGTATCTTTGAGCATATATACTTTGCACTGCCAAATTCTGTGGTTTTTGGGAGGTCTGTGTATGAATCTAGAAGGAAATTCGGGGAAATATTGGCTACTGAGAGCCCTGTTGATTGTGATGTTGTGATAGCAGTTCCAGATTCTGGTGTGGTGGCTGCACTTGGTTATGCTGCAAAAGCTGGGGTCCCTTTTCAGCAGGGGTTGATAAGGTCACACTATGTGGGGAGGACTTTCATTGAGCCATCACAGAAGATTAGGGACTTTGGTGTGAGGTTGAAGCTCTCACCAGTCAAGGCTGTGCTTGAAGGGAAGAGGGTTGTGGTTGTGGATGACTCAATTGTCAGGGGAACTACATCATCCAAAATTGTGAGGTTGATAAAGGAGGCAGGTGCCAAGGAAGTTCACATGAGGATTGCATGCCCACCAATGATAGGATCATGTTATTATGGGGTGGACACTCCTAGCTCAGAGGAGTTGATCTCTAATAGGATGAGTGTGGAGGAAACAAGGGAGTTTATTGGATCGGATTCACTTGCTTTTCTTTCATTTGATAGCTTGAAGAAGTTGTTGGGTAATGATTCTCCCAATTTCTGTTATGCTTGCTTCTCTGGGATGTATCCTGTTGAACCCGATGAACTTAAAGTCAAGAGGGTTGGTGACTTTGTGGATGATGGCTTAAGTGGGAGTTTTGAATCTATCGATGGGGGTTGGGTTCAAGCTAACCGAAATCAGAAAGAGGTAAAGATTGTTGGTATCTAA 1749 0.4563 MAAPNLSTLSSSSSSSSSSSSLSLSKSKPCSLPVNTSTTNTCFFHNKTLPNPTLFSKTPLSHSHNKTLFSASCKNPNNTFPEEAFFNDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVAVHNDVLQSVTGVGLVSDVFNESKLDQLPGTLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRAKLEDSGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLQGAYSFVFVTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVYPGEVLVVDQNGVQSLCLMPHPQPKQCIFEHIYFALPNSVVFGRSVYESRRKFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVRLKLSPVKAVLEGKRVVVVDDSIVRGTTSSKIVRLIKEAGAKEVHMRIACPPMIGSCYYGVDTPSSEELISNRMSVEETREFIGSDSLAFLSFDSLKKLLGNDSPNFCYACFSGMYPVEPDELKVKRVGDFVDDGLSGSFESIDGGWVQANRNQKEVKIVGI* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02648 582 Hamap Amidophosphoribosyltransferase [purF]. 95 536 IPR005854 GO:0004044|GO:0009113
Rops10g02648 582 MobiDBLite consensus disorder prediction 1 32 - -
Rops10g02648 582 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 94 543 - -
Rops10g02648 582 NCBIfam amidophosphoribosyltransferase 96 537 IPR005854 GO:0004044|GO:0009113
Rops10g02648 582 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 96 537 IPR029055 -
Rops10g02648 582 Pfam Glutamine amidotransferase domain 174 293 IPR017932 -
Rops10g02648 582 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 96 315 IPR017932 -
Rops10g02648 582 CDD GPATase_N 96 346 IPR035584 -
Rops10g02648 582 SUPERFAMILY PRTase-like 331 541 IPR029057 -
Rops10g02648 582 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 96 319 IPR029055 -
Rops10g02648 582 Gene3D - 355 519 IPR029057 -
Rops10g02648 582 Pfam Phosphoribosyl transferase domain 355 467 IPR000836 -
Rops10g02648 582 CDD PRTases_typeI 358 491 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02648 Rops-Chr10 45896768 45898878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02648 88 569 PRT Gene Family AT2G16570 86.157 0.0 861
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02648 K00764 - gmx:100791919 923.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02648 10 45896768 45898878 Rops10g02648 10 45896768 45898878 ECH