Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02626 ATGGGAGAGGCAGCGCTCGGTGGTTGCTGTCCGCCTATGGATCTGTTCCGTTCGGAGCCGATGCAATTGGTTCAGCTCATCATTCCCATGGAATCAGCTCATCACACCGTCTCTTACCTCGGCGACCTTGGTCTCCTTCAATTCAAAGATCTCAATGCAGAGAAGAGCCCCTTTCAACGAACTTTTGCAACTCAGATAAAAAGATGTGGAGAGATGGCTCGTAAATTGCGTTTTTTCAAAGAGCAAATGTTGAAGGCTGGTGTTTCATCAATAGATTCCACAACCCAGCCTGATACAAACATTGATGACCTTGAGGTAAAACTTACAGAACTTGAGTCAGAGTTAACTGAGATGAATGCAAACTGTGAAAAGTTGCAACGCTCTCACAATGAACTAGTGGAGTATAAGCTTGTTCTGCAGAAGGCTGGTGAATTTTTCCACTCAGCTCAAAGCCATGCCATAGAGCATCAGAGAGAATATGAATCACGCCATCTGAGTGGTGAATCTATTGAAACACCTTTATTGCAGGACCAAGAATTATCCACTGATTCATTGAAGCAACTTAAGTTGGGGTTTTTAGCAGGTCTTGTTCCCAGGGAAAAGTCCATGGCATTTGAGAGAATTTTGTTTCGTGCTACTAGAGGCAATGTGTTTTTGAGGCAGGTCACTGTTGAGGATCCTGTCACAGATCCTGTTTCTAGAGAACAGGTTGAGAAAAATGTGTTTGTGGTCTTCCATGCTGGTGAAAAAGCAAAAGCCAAGATTCTGAAAATATGTGAGGCATTTGGTGCTAATCGTTACCCTTTTGCTGAGGAACTAGGAAAACAATCTCAAATGATTTCAGAGGTTTCAGGAAGACTTTCAGAATTGAAGACCACAATAGATGCTGGACTGCTGCACCGGGACAACTTGCTACAGACTATTGGGGCTCAATTTGAGCAATGGAATATTTTGGTGAGGAAGGAGAAATCTATTTACCATACCTTGAACATGCTCAGCCTTGATGTGACCAAAAAATGTCTTGTGGCTGAGGGTTGGAGTCCTGTTTTTGCAACAAAGATGATTCAGGATGCATTGGAGCGGGCAGCATTTGACTCTAACTCCCAAGTCAGTGCCATTTTCCAAATTTTGCATACTAGGGAGATGCCACCTACCTATTTTCGCACAAACAAATTTACTTATCCATTTCAAGAAATTATTGATTCGTACGGGGTTGCGAAGTATCAGGAGGCAAATCCTGCTGTATATACCATAATTACCTTTCCATTTCTTTTTGCTGTCATGTTTGGTGATTGGGGACATGGAATATGTTTACTACTGGGAGCTCTGTTTTTCATAATCAGGGAGAAGAAACTTTCTGGCCAGAAACTTGGAGACATCACAGAGATGACTTTTGGAGGTCGTTATGTGATCATGTTGATGGCCCTCTTCTCAATATTCACTGGGTTGATCTATAATGAGTTCTTTTCTGTTCCATTTGAACTCTTTGGTCCTTCAGCATATACATGTCGTGACCTTTCTTGCAGGGATGCTACTACAGTTGGCCTGATAAAAGTGCGTCGCACTTACCCATTTGGAGTAGACCCTGTATGGTATGGAACACGAAGTGAATTACCATTTCTAAACTCATTGAAAATGAAAATGTCAATTCTTCTTGGGGTTGCTCAAATGAACCTTGGAATTATAATGAGCTTTTGCAATGCCACATTCTTTGGGAATGGCTTAAATATATGGTTCCAATTTATTCCTGAGATAATATTTCTCAACAGTCTATTCGGTTACCTATCTGCTCTCATTGTCGTGAAGTGGTGCACTGGTTCTAAAGCTGATTTGTACCATGTAATGATATACATGTTTCTGAGTCCTACAGATGATTTGGGTGAAAACCAACTCTTTGATGGTCAGAAAATTCTGCAGATTGTGCTTTTACTTCTGGCCGTTGTCTCTGTACCCTGGATGCTGATCCCCAAACCATTTATTTTGAAGAAGCAACATGAAAATAGGCACCAGGGTGAATCTTATACACCACTTCAAAGCACAGAGGAGAGCTTGCAAGTGGAGTTAAATCATGATTCCCATGGTCACGAGGAATTTGAGTTCAGTGAAGTCTTCGTGCATCAACTCATACACACCATAGAATTTGTACTTGGAGCAGTCTCTAATACAGCTTCTTATCTTCGTTTATGGGCTCTTAGCCTTGCTCATTCCGAGTTATCAACCGTATTCTATGAGAAGGTTCTCATCATGGCATGGGGGTACAACAATGTGATTATCCTGATAGTGGGCTTCATTATCTTTGTTTTTGCTACCGTTGGAGTGTTACTTGTCATGGAAACTTTAAGTGCCTTCTTGCATGCTTTACGACTTCACTGGGTGGAGTACCAAAACAAGTTCTATGAGGGTGATGGTTACAAGTTCCACCCCTTCTCCTTCTCATTGCTAGATGATGAGGAAGACTGA 2460 0.4175 MGEAALGGCCPPMDLFRSEPMQLVQLIIPMESAHHTVSYLGDLGLLQFKDLNAEKSPFQRTFATQIKRCGEMARKLRFFKEQMLKAGVSSIDSTTQPDTNIDDLEVKLTELESELTEMNANCEKLQRSHNELVEYKLVLQKAGEFFHSAQSHAIEHQREYESRHLSGESIETPLLQDQELSTDSLKQLKLGFLAGLVPREKSMAFERILFRATRGNVFLRQVTVEDPVTDPVSREQVEKNVFVVFHAGEKAKAKILKICEAFGANRYPFAEELGKQSQMISEVSGRLSELKTTIDAGLLHRDNLLQTIGAQFEQWNILVRKEKSIYHTLNMLSLDVTKKCLVAEGWSPVFATKMIQDALERAAFDSNSQVSAIFQILHTREMPPTYFRTNKFTYPFQEIIDSYGVAKYQEANPAVYTIITFPFLFAVMFGDWGHGICLLLGALFFIIREKKLSGQKLGDITEMTFGGRYVIMLMALFSIFTGLIYNEFFSVPFELFGPSAYTCRDLSCRDATTVGLIKVRRTYPFGVDPVWYGTRSELPFLNSLKMKMSILLGVAQMNLGIIMSFCNATFFGNGLNIWFQFIPEIIFLNSLFGYLSALIVVKWCTGSKADLYHVMIYMFLSPTDDLGENQLFDGQKILQIVLLLLAVVSVPWMLIPKPFILKKQHENRHQGESYTPLQSTEESLQVELNHDSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLIMAWGYNNVIILIVGFIIFVFATVGVLLVMETLSAFLHALRLHWVEYQNKFYEGDGYKFHPFSFSLLDDEED* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02626 819 PIRSF ATP6V0A1 11 819 IPR026028 GO:0000220|GO:0046961
Rops10g02626 819 PANTHER VACUOLAR PROTON ATPASES 15 816 IPR002490 GO:0033179|GO:0046961|GO:1902600
Rops10g02626 819 Coils Coil 101 128 - -
Rops10g02626 819 Pfam V-type ATPase 116kDa subunit family 39 811 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02626 Rops-Chr10 45477719 45489080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02626 13 819 Primary Pumps ATPases(2) AT4G39080 76.143 0.0 1285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02626 K02154 - gmx:100810062 1406.73