Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02611 ATGGCTCCAAAGAAGGACAAGGCTCCCCCACCATCCTCGAAGCCTGCCAAGTCAGGCGGTGGGAAGCAGAAGAAGAAGAAGTGGAGCAAGGGAAAGCAGAAGGAGAAGGTGAACAACATGGTGCTCTTCGATCAGGCCACTTATGACAAGCTCCTCTCTGAGGCTCCCAAATACAAGCTCATCACTCCTTCCATTCTCTCTGATCGTTTGAGGGTTAATGGATCACTTGCAAGGAGGGCTATAAGAGAATTGATGGCGAGAGGTTCAATCAGGATGGTATCTGCCCACGCAAGTCAGCAAATTTACACCAGAGCTACAAACACCTAG 327 0.4985 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSILSDRLRVNGSLARRAIRELMARGSIRMVSAHASQQIYTRATNT* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02611 108 PANTHER 40S RIBOSOMAL PROTEIN S25 1 108 IPR004977 -
Rops10g02611 108 MobiDBLite consensus disorder prediction 1 36 - -
Rops10g02611 108 FunFam 40S ribosomal protein S25 21 108 - -
Rops10g02611 108 Pfam S25 ribosomal protein 7 105 IPR004977 -
Rops10g02611 108 Gene3D - 21 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02611 Rops-Chr10 45250548 45252449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02611 1 107 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 93.458 2.14e-56 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02611 K02975 - rcu:8285336 159.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02611 10 45250548 45252449 Rops10g02611 10 45250548 45252449 ECH