Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops10g02597 | ATGGTGGATCGGCGAGGCATAGTGTGGTTTGGGTTCTTGTTCTTTTTGCTATTTGAGGTGACATTGGAGCAGATTGAGTCACTGAGTTCACCAACTGAGAGAGCAGCACTTCTTCAACTGAGGGGTTCTCTGGGTTTGAGGAGCAGGGAATGGCCAAGAAAGCCAGACCCTTGCTTAATCTGGAATGGTATCACATGCCAGAATGGTCGTGTTGTTGGGATCAATATCTCTGGCTTTAGAAGAACAAGACTTGGCAGAAGAAACCCACAATTTGCAGTGGATGCCTTGGCCAATTTCACTCTCTTGCAGACTTTCAATGCCTCCAATTTCCTCCTCCCTGGTCCTATTCCTGATTGGTTTGGTCTCAACCTCCCTTCACTTCGTGTGCTTGATCTTCGTTCTTGCGCCATTGTTAATGCTATCCCTTCCACTCTTGGGAATTTAACCAACCTCACTGCTCTATATCTTTCTGATAACAAACTTACTGGGACAGTTCCTGATACTCTTGGTCAACTCTCAGCCCTTTCTGTTCTTGATCTCTCCAGGAATTCTCTTTCTGGGTTCCTACCAACATCATTTGCCTTTCTTGCAAATCTTTCTTACCTTGACATGTCTGCAAATTTCTTGTCTGGGCCTATACCCCCGGGCATAGGGACACTCTCCAGGTTACAATACTTGAATCTTTCCAACAATGACCTAACTTCTTTGCCTGCCCAATTGGTGGGTCTTAATAGCTTAACTGACCTTGATCTTAGTGGGAATTCTTTCTCTGGTGGAGTTCTTCCGGATTTGAAAGGGTTGAGGAACTTGCGGAGAATTATACTTGCAAACAGCAGGCTCAATGGACCTTTGCAGGGGGACTTGTTTACTGCTTCATTGCAATTGCAGATTATTGTGCTGAGACAAAACAATTTTACTGGTTCTTTGCCTGTTGAGTTGTGGTCTTTGCCAAGATTGACCTTCCTCGATGTGTCTGGCAATAACTTCAGTAGTCTGCTTCCAAATTCTAGTTCAACTGCCAATGCTACTGTTTCGGTGCTGAATATTTCTCATAATAAGTTTTATGGAGGCCTCACACCTGTGCTCAGAAGGTTTGGTTTTGTTGATCTTTCAAACAATTATTTTGAGGGCAAGGTTCTGGATTTCATGCTTAATGTGTCTCTAGATAGCAACTGCCTCCAAAACGTGACAAATCAGAGGACACCAGGGGAATGTGCATCATTTTATGCAGAGAGGGGCCTCAGCTTTGATAATTTTGGACGCCCGAATTCAACGAATCCTCCTGCTGCAGGAGGCTCTGGGAAGAGTAATAAAACTAAGATCATATTGGCAGCAGTCTTGGGTGGACTGGGTTTAATTGCACTTTTGGTGTTCCTACTGGTCCTGTTGCTGCTGTGCCTTCGTAAGAGGGGGGATTCAAATAAAAGGGGAAATGGTGTGGGCCCTGCTCCTGCTGGAGGCAGTCCTCCACATCCTGGTGTATCAATAAACTTTTCAAATGTAGGAGACTCATTTACATATCATCAGTTGCTCCAGGCAACAGGAGATTTCAACGACGCAAATCTTATCAAACATGGCCACACTGGGGATTTCTTCAATGGTGTTTTGGAGAATGGGACTCGTGTCATCGTCAAAAGGATCGACATGCATTCAACTAAAAAGGATGCTTACCTAGTGGAATTGGACTTCTTCAGTAGGGTTTCTCATCAAAGATTTGTTCCCTTGTTAGGTCATTGCTTAGAAAATGAGAACGAGAAGTGCCTGGTTTATAAATATATGCCAAATGGGGACCTGTCTAATTCCTTATTCTACAAAAACTCGACGTCTGAAGATGGTACGTTGCAGTCATTGGACTGGATAACTAGGTTAAAAATTGCTACTGGAGCAGCTGAGGCCCTAACGTATCTGCATCATGAATGTGTTCCACCCATTGTTCACAGAGATGTTCAAGCGAGCAGTATACTACTAGATGATAAATATGAAGTTCGGTTAGGGAGTCTAAGTGAAGCCTGTACTCAAGAAGGTGATACTCATCAAAGTAAAATCACCCGGTTTCTGCGATTGCCTCAGTCCTCTGAACAAGGCACATCTGGTTCATCTACATCAGTTTGTGCCTATGACGTTTATTGCTTTGGGAAAGTGTTACTTGAGCTGGTGACTGGTAAGCTGGGAATTAGTGCATCCAGTGATGGTGAAGTAAAGGAATGGTTGGATCATATTCTACCTTGCATTAGTATGTATGACAAGGAGCTTGTGACAAAAATTGTTGATCCATCTCTGGTTGTTGATGAGGATTTCTTAGAGGAAGTTTGGGCTATAGCCATAGTTGCCAGGTCTTGCCTAAATCCCAAACCTTCAAGAAGACCCCCAATGAGATATGTCCTCAAGGCTTTGGAAAACCCTTTAAAAGTTGTAAGGGAAGAAAGTTCCGGTTCTTCACGGCTTAAAGCAACCTCTTCTAGAGGCTCTTGGAATGCTACTTTGTTCGGTAGTTGGCGGCAGAGTTCATCCGATGTAACAGTAATTCCAGCAGCCTCTGGTACAAAAGTAGAAGGAACTAGTAGTTTAAAGCTTTCAGGAACTACCGGTTCGCAGTCACAGGGTAGCTTCCACAATGGTGGTGGTGATATTTCATCATCTCGAAGGCGTCATTCGAATGAGATATTCCCAGAGCCACCCGATGCAGAGAGGTTGGAGCAGGAATAG | 2706 | 0.4405 | MVDRRGIVWFGFLFFLLFEVTLEQIESLSSPTERAALLQLRGSLGLRSREWPRKPDPCLIWNGITCQNGRVVGINISGFRRTRLGRRNPQFAVDALANFTLLQTFNASNFLLPGPIPDWFGLNLPSLRVLDLRSCAIVNAIPSTLGNLTNLTALYLSDNKLTGTVPDTLGQLSALSVLDLSRNSLSGFLPTSFAFLANLSYLDMSANFLSGPIPPGIGTLSRLQYLNLSNNDLTSLPAQLVGLNSLTDLDLSGNSFSGGVLPDLKGLRNLRRIILANSRLNGPLQGDLFTASLQLQIIVLRQNNFTGSLPVELWSLPRLTFLDVSGNNFSSLLPNSSSTANATVSVLNISHNKFYGGLTPVLRRFGFVDLSNNYFEGKVLDFMLNVSLDSNCLQNVTNQRTPGECASFYAERGLSFDNFGRPNSTNPPAAGGSGKSNKTKIILAAVLGGLGLIALLVFLLVLLLLCLRKRGDSNKRGNGVGPAPAGGSPPHPGVSINFSNVGDSFTYHQLLQATGDFNDANLIKHGHTGDFFNGVLENGTRVIVKRIDMHSTKKDAYLVELDFFSRVSHQRFVPLLGHCLENENEKCLVYKYMPNGDLSNSLFYKNSTSEDGTLQSLDWITRLKIATGAAEALTYLHHECVPPIVHRDVQASSILLDDKYEVRLGSLSEACTQEGDTHQSKITRFLRLPQSSEQGTSGSSTSVCAYDVYCFGKVLLELVTGKLGISASSDGEVKEWLDHILPCISMYDKELVTKIVDPSLVVDEDFLEEVWAIAIVARSCLNPKPSRRPPMRYVLKALENPLKVVREESSGSSRLKATSSRGSWNATLFGSWRQSSSDVTVIPAASGTKVEGTSSLKLSGTTGSQSQGSFHNGGGDISSSRRRHSNEIFPEPPDAERLEQE* | 902 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops10g02597 | 901 | Gene3D | Ribonuclease Inhibitor | 30 | 192 | IPR032675 | - | |
Rops10g02597 | 901 | PANTHER | RECEPTOR KINASE-LIKE PROTEIN XA21 | 97 | 792 | - | - | |
Rops10g02597 | 901 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase | 593 | 818 | - | - | |
Rops10g02597 | 901 | Gene3D | Ribonuclease Inhibitor | 193 | 408 | IPR032675 | - | |
Rops10g02597 | 901 | Pfam | Leucine rich repeat | 268 | 329 | IPR001611 | GO:0005515 | |
Rops10g02597 | 901 | Pfam | Leucine rich repeat | 149 | 207 | IPR001611 | GO:0005515 | |
Rops10g02597 | 901 | Pfam | Leucine rich repeat | 219 | 255 | IPR001611 | GO:0005515 | |
Rops10g02597 | 901 | FunFam | Predicted protein | 487 | 592 | - | - | |
Rops10g02597 | 901 | SUPERFAMILY | Protein kinase-like (PK-like) | 493 | 798 | IPR011009 | - | |
Rops10g02597 | 901 | FunFam | Probable LRR receptor-like serine/threonine-protein kinase At2g16250 | 30 | 189 | - | - | |
Rops10g02597 | 901 | ProSiteProfiles | Protein kinase domain profile. | 517 | 803 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops10g02597 | 901 | MobiDBLite | consensus disorder prediction | 850 | 901 | - | - | |
Rops10g02597 | 901 | MobiDBLite | consensus disorder prediction | 850 | 876 | - | - | |
Rops10g02597 | 901 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 190 | 287 | - | - | |
Rops10g02597 | 901 | SMART | LRR_bac_2 | 220 | 239 | - | - | |
Rops10g02597 | 901 | SMART | LRR_bac_2 | 148 | 168 | - | - | |
Rops10g02597 | 901 | SMART | LRR_bac_2 | 316 | 335 | - | - | |
Rops10g02597 | 901 | SMART | LRR_bac_2 | 243 | 264 | - | - | |
Rops10g02597 | 901 | FunFam | Probable LRR receptor-like serine/threonine-protein kinase At2g16250 | 291 | 421 | - | - | |
Rops10g02597 | 901 | Pfam | Protein tyrosine and serine/threonine kinase | 523 | 795 | IPR001245 | GO:0004672|GO:0006468 | |
Rops10g02597 | 901 | ProSiteProfiles | Leucine-rich repeat profile. | 222 | 244 | IPR001611 | GO:0005515 | |
Rops10g02597 | 901 | Gene3D | Phosphorylase Kinase; domain 1 | 494 | 592 | - | - | |
Rops10g02597 | 901 | MobiDBLite | consensus disorder prediction | 877 | 901 | - | - | |
Rops10g02597 | 901 | Gene3D | Transferase(Phosphotransferase) domain 1 | 593 | 818 | - | - | |
Rops10g02597 | 901 | SUPERFAMILY | L domain-like | 90 | 416 | - | - | |
Rops10g02597 | 901 | SMART | LRR_typ_2 | 172 | 195 | IPR003591 | - | |
Rops10g02597 | 901 | SMART | LRR_typ_2 | 148 | 171 | IPR003591 | - | |
Rops10g02597 | 901 | SMART | LRR_typ_2 | 316 | 339 | IPR003591 | - | |
Rops10g02597 | 901 | SMART | LRR_typ_2 | 124 | 147 | IPR003591 | - | |
Rops10g02597 | 901 | SMART | LRR_typ_2 | 220 | 243 | IPR003591 | - | |
Rops10g02597 | 901 | PRINTS | Leucine-rich repeat signature | 175 | 188 | - | - | |
Rops10g02597 | 901 | PRINTS | Leucine-rich repeat signature | 220 | 233 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops10g02597 | Rops-Chr10 | 45049507 | 45055035 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops10g02597 | 32 | 690 | Miscellaneous Gene Families | AT2G16250 | 56.306 | 0.0 | 721 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XIV | Rops10g02597 | PK_Tyr_Ser-Thr | 1.5e-20 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops10g02597 | - | - | gmx:100805769 | 1379.39 |