Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02591 ATGGCTTCAAATTCCAATTCGGATTCTCCAACACCACCTGCACCTGATTCATCTTCCTCACAATCCCCACCACCACCATCCAACGATGATTCTTCGTCGTCGCCACCACCGCCGTCATCCTCCCCACCACCATCACCTTCCCCTCCGTCATCGCCTCCGCCGCCATCAGATGATCAGAAATCTCCACCCCCGCCATCAGATGATCATAAATCTCCACCCCCGCCATCTGATTCTTCTTCCCAATCTCCCCCACCACCTCCCAATAACAAGAAGTCACCCCCCAGCCCCCCGCCTCCTCCTCCGCCACCACCACCTCCATCAAGCCGCCAGTTTTCTCCTCCTCCGCCATCACATCACCGGTTGTCTCCACCCAGGTCATCAAACTCTGATACCCATAAAGACAGTGGGAGCCATAGCCAATTGAGCGTGCCAACTATAATAGCAGTTGCAGCTGGTGCTGGGATATTGCTCCTTGTCATTATCCTATTCGTCATTGCATGTTCAAGAAGGAAGAAGAAAGCACAAAGCCCCGTCATTTACTTCTCTAATCCAGCTGGAGATGATGAGTATTTCAAACATCCAGCTTCTGCTCCAAATCAGTATGGGTTCAATAACAGGGACCATGTTCTTAATATTCCTCCACCACCAGGTGCAGGTTGGGGAGCACCCCCACCTCCTCCCCAGATGGTTAGTGGTGACATGAGCAACTCCAGTTTCTCTGGCTCCCAAGGTCCCGTATTGCCACCCCCACACCCTACAGTGGCCCTTGGATTCAACCAAAGCTCCTTCACCTATGATGAGTTATCAGCTGCTACTGGTGGGTTTGCCCAACGCAACCTTCTGGGTCAAGGTGGGTTCGGATATGTACACAAAGGTGTTCTGCCCAATGGTAAGGAAATAGCAGTGAAGAGCCTCAAATCCACTGGGGGACAAGGAGATAGAGAATTCCAAGCTGAGGTTGATATTATCAGCCGTGTCCATCATCGCCATCTTGTGTCACTTGTTGGGTATAGCATTTCGGACAGCAAAAAGTTGTTGGTATATGAATTTGTGCCTAACAAGACCCTTGAGTACCACCTTCATGGAAAGGGTAGACCTGTCATGAATTGGGGCACCAGGCTCAAAATTGCGATTGGATCAGCCAAAGGACTTGCTTACTTACACGAGGACTGTCACCCTCGTATCATTCACCGAGACATAAAGGGTGCAAACATTCTACTTGAGAACAACTTCGAAGCCAAAGTGGCAGATTTTGGATTGGCAAAGATTACTCAAGACACTAACACTCATGTTTCTACTCGCGTGATGGGAACATTTGGGTATTTGGCTCCTGAGTATGCATCAAGTGGTAAGCTAACTGATAAATCTGATGTCTTCTCGTTCGGTATTATGCTTTTGGAGATCATAACAGGACGGCGCCCAGTGGACAACACCCATGATTATGATGAGGATAGTTTGGTTGACTGGGCTAGACCACTTTGTCTAAAGGTACTGGAAAATGGAACCTTTGAGGGACTGGTGGATCTACGTTTAGAGGACAACTTTAACAAACAGGAGATGGCACGAATGGTGGCTTGTGCATCGGCTAGTGTTAGGCACTCAGCAAAGAGGCGCCCAAGAATGAGCCAGATTGTACGGGTATTGGAGGGAGATGCCTCAGTAGATGTCCTTAATCATGACCGGGTGAAACCTGGCCAAAGTGCAATTTTCAGCAGCGGAAGCGGCGATTATGATGCTGGTGCATACAGTGCTGACATGAAAAGGTTCAGGCAACTAGCATTTGAAAGCAGCACTGGTGGTAGCAGTGAGTTTGGTGGAACGAGTGAGTATGGCCTCAACCCTTCCATCTCAAGCAGTGATCAATCATCACCTGCTGAATATGGCAGGAGGACAGGAAGTAGGATGCACACTCCTTGA 1917 0.4924 MASNSNSDSPTPPAPDSSSSQSPPPPSNDDSSSSPPPPSSSPPPSPSPPSSPPPPSDDQKSPPPPSDDHKSPPPPSDSSSQSPPPPPNNKKSPPSPPPPPPPPPPPSSRQFSPPPPSHHRLSPPRSSNSDTHKDSGSHSQLSVPTIIAVAAGAGILLLVIILFVIACSRRKKKAQSPVIYFSNPAGDDEYFKHPASAPNQYGFNNRDHVLNIPPPPGAGWGAPPPPPQMVSGDMSNSSFSGSQGPVLPPPHPTVALGFNQSSFTYDELSAATGGFAQRNLLGQGGFGYVHKGVLPNGKEIAVKSLKSTGGQGDREFQAEVDIISRVHHRHLVSLVGYSISDSKKLLVYEFVPNKTLEYHLHGKGRPVMNWGTRLKIAIGSAKGLAYLHEDCHPRIIHRDIKGANILLENNFEAKVADFGLAKITQDTNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGIMLLEIITGRRPVDNTHDYDEDSLVDWARPLCLKVLENGTFEGLVDLRLEDNFNKQEMARMVACASASVRHSAKRRPRMSQIVRVLEGDASVDVLNHDRVKPGQSAIFSSGSGDYDAGAYSADMKRFRQLAFESSTGGSSEFGGTSEYGLNPSISSSDQSSPAEYGRRTGSRMHTP* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02591 638 MobiDBLite consensus disorder prediction 1 15 - -
Rops10g02591 638 MobiDBLite consensus disorder prediction 122 139 - -
Rops10g02591 638 Gene3D Phosphorylase Kinase; domain 1 252 350 - -
Rops10g02591 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 395 407 IPR008271 GO:0004672|GO:0006468
Rops10g02591 638 MobiDBLite consensus disorder prediction 597 628 - -
Rops10g02591 638 FunFam proline-rich receptor-like protein kinase PERK1 253 350 - -
Rops10g02591 638 MobiDBLite consensus disorder prediction 597 638 - -
Rops10g02591 638 Gene3D Transferase(Phosphotransferase) domain 1 351 562 - -
Rops10g02591 638 MobiDBLite consensus disorder prediction 1 139 - -
Rops10g02591 638 FunFam Proline-rich receptor-like protein kinase PERK1 351 559 - -
Rops10g02591 638 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 152 592 IPR047117 -
Rops10g02591 638 Pfam Protein tyrosine and serine/threonine kinase 278 482 IPR001245 GO:0004672|GO:0006468
Rops10g02591 638 ProSitePatterns Protein kinases ATP-binding region signature. 281 303 IPR017441 GO:0005524
Rops10g02591 638 ProSiteProfiles Protein kinase domain profile. 275 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g02591 638 SUPERFAMILY Protein kinase-like (PK-like) 255 548 IPR011009 -
Rops10g02591 638 SMART serkin_6 275 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g02591 638 MobiDBLite consensus disorder prediction 16 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02591 Rops-Chr10 44972595 44975855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02591 78 594 Trihelix Transcription Factor Family AT1G70460 49.520 4.32e-155 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Rops10g02591 PK_Tyr_Ser-Thr 6.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02591 - - gmx:100806299 778.859