Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02557 ATGTTACAAGGCGATTACAACAATGACAATGCATTCGTTGTGGAAGATGAGAAACCAGGAGATTTGAATAATCTAAAGCGAACAACAAAGGGTAAGCCTCCAAGGCATGTCTCCGGTATGAGACACAGCATTAGCTCCACCAGATTGCTGGCTTCAGGAGATTTGAGTTTGGATGTGGAGGTTACTGGGAGCAAGTCATCTTCTGAAGACAAGACAGAGTTTCTACCCATATTTCGGTCAGGAAGTTGTGCTGAAAGAGGAGCTAAACAATATATGGAAGATGAACACATTTGTGTAGATGATCTTATTCCACATATAGCTTCTTCTTCAAATATTCCTTTACCAGGAGCTTTCTATGGGGTGTTCGATGGTCATGGAGATTCTAGTTTGCTTGATATCTCCTCTGGCACCACTGCTTTAACTGCTCTTGTATTTGGAAGGACCATGATAATTGCCAATGCTGGGGATTGTCGAGCTGTACTGGGGAGGCGAGGTAGAGCAATTGAGATGTCAAAAGACCAGAAACCAAATTGCATGTCAGAAAGGCTAAGGATTGAGAAGCTTGGTGGAGTGGTATATGATGGATACTTGAATGGCCAATTATCTGTTTCCCGTGCCTTAGGAGACTGGCACATGAAGGGTCCCAAGGGTTCTGCCTCTCCTTTGAGTGCTGAACCAGAGTTGCAGGAAATCAACCTGACTGAGGATGATGAGTTCTTGATTATGGGCTGTGATGGCCTGTGGGATGTAATGAGTAACCAATGTGCTGTGACTATGGCAAGAAAGGAATTGATGATACATAATGATCCTCAAAGGTGTTCAAGAGAGCTGGTCAGAGAGGCTCTCAAGCGTAACTCGTGTGATAATTTAACAGTTATTGTGGTATGTTTTTCTGCAGATCCTCCTCCTAGGATGGAGATAGCTCCTTCTAGAGTCAGGAGGAGTATATCAGCAGAAGGCCTCAATTTACTTAAGGGTGTATTGGACTGTTAG 993 0.4371 MLQGDYNNDNAFVVEDEKPGDLNNLKRTTKGKPPRHVSGMRHSISSTRLLASGDLSLDVEVTGSKSSSEDKTEFLPIFRSGSCAERGAKQYMEDEHICVDDLIPHIASSSNIPLPGAFYGVFDGHGDSSLLDISSGTTALTALVFGRTMIIANAGDCRAVLGRRGRAIEMSKDQKPNCMSERLRIEKLGGVVYDGYLNGQLSVSRALGDWHMKGPKGSASPLSAEPELQEINLTEDDEFLIMGCDGLWDVMSNQCAVTMARKELMIHNDPQRCSRELVREALKRNSCDNLTVIVVCFSADPPPRMEIAPSRVRRSISAEGLNLLKGVLDC* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02557 330 Gene3D - 72 130 IPR036457 -
Rops10g02557 330 Gene3D - 131 300 IPR036457 -
Rops10g02557 330 MobiDBLite consensus disorder prediction 18 42 - -
Rops10g02557 330 SMART PP2C_4 69 295 IPR001932 -
Rops10g02557 330 CDD PP2Cc 78 297 IPR001932 -
Rops10g02557 330 ProSiteProfiles PPM-type phosphatase domain profile. 79 297 IPR001932 -
Rops10g02557 330 SUPERFAMILY PP2C-like 73 298 IPR036457 -
Rops10g02557 330 ProSitePatterns PPM-type phosphatase domain signature. 118 126 IPR000222 GO:0043169
Rops10g02557 330 Pfam Protein phosphatase 2C 131 289 IPR001932 -
Rops10g02557 330 PANTHER PROTEIN PHOSPHATASE 2C 67 127 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02557 Rops-Chr10 44478293 44481429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02557 1 329 PP2C-type Phosphatase Gene Family AT2G33700 63.271 1.20e-165 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02557 K14803 - gmx:100778015 555.058