Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02522 ATGGAAAGACAAAAGTACCCCTCGGCATATATAACGGACAAACGGTGCAAGAGGGACAGGGAGGTTTTGTCAGAAGAGACAGAGAGAGAAGAAGTGAATGAGGAAGAAAATAAAACCGCAACTCTTTTCATAAAAACACCTCTTCCACCTCTCTTTCTCTCTCTCTCACTAACTAATACACGGGTGTGCTGTCAGTCCCATTTGCCACTTTCTGTTGCTTTCTTCGTCTATCTCTATGTGTCTCTCGCTGCACTACATTTCACGCTAATAGCTGGCGAGGTTGTTATTGTGCTCACACAATCACTCCAAGTAATGGGTTGTTGCCAATCTCAGTTTTCCAGACACTCCAATCTTCCTCACAGCAACGATAACGTTGCTTCATCACCCTCCAACGGCGGCGTGGACGTGCCGGCTTTCTCGGAGTTCTCACTTTCCGACCTCAAAACCGCCACCAATGGCTTCAGCTCCGATCATGTCGTGTCCGAGAGTGGCGAGAAAGCTCCTAATGTGGTGTACAAAGGTCGACTACAGAATCATAACCGTCGTTGGATTGCAGTTAAGAGGTTTTCTAAGTTGGCATGGCCTGATCCCAAACAGTTCGCTGATGAAGCTTGGGGTGTTGGGAAATTGCGACACCAGAGGCTTGCCAATTTGATTGGTTATTGCTGTGACGGTGATGAGAGGCTCCTCGTTGCTGAGTACATGCCCAATGATACTCTCGCCAAACATCTTTTCCACTGGGAGAATCAGACAATTGAGTGGAACATGCGGTTAAGAGTTGCCCAATCCATCACTGAAGCATTAGACTATTGTAGTGACCAAGGTTATCCATTGTACCATGACTTGAATGCTTACAGAGTTTTATTTGATGAGAATGGTGATCCCCGGCTTTCATGTTTTGGTTTGATTAAGAACAGCAGGGATGGGAAAAGTTATAGCACAAATCTTGCTTATACACCTCCTGAGTATCTGAGAAATGGGAGGGTGACTCCAGAAAGTGTTATCTTCAGCTTTGGGACTATGTTATTGGATCTCCTAAGTGGCAAGCATATCCCTCCGAGTCATGCTCTTGACATGATAAGAGGTAAAAATATTCAACTCCTGATGGATTCACATTTGGAGGGTAACTTTTCAACGGAAGAGGCAACTGTGGTTTTTGATCTTGCCTCACAATGTTTGCAGTATGAACCTCAAGAGCGACCCAAGACCAAGGACCTTGTTGCAACACTTTCTGCACTACAAACTCAACCTGATGTTCCATCGTATGTTATGCTTGGAATTCCAAAGCGTGAAGAAGTGCCTCCTACCCCACAGCATCCACTATCTCAAATGGGTGATGCTTGTTCTCGTATGGACCTTACTGCTATCCATCAGATTTTGTTGATGACAAACTATAGAGATGATGAAGGGTGTAATGAGTTATCTTTCCAAGAGTGGACGCAGCAAACGAGGGATATGTTGGAGGCAAGAAAGCGTGGTGACTTGGCATTTCGGGACAAGGATTTTAAAACATCAATTGAGTGTTACTCCCAGTTCATTGATGTTGGAACCATGGTTTCCCCAACTGTTTATGCACGGAGAAGTCTTTGCTATCTTTTTTGCGATCAACCAGATGCTGCTCTCAGAGATGGAATGCAAGCTCAATGTGTCTATCCTGACTGGTCCACAGCATTTTACATGCAGGCGGTCGCTCTTTCCAAATTAAACATGAATAAGGATGCAGCTGACATGTTGAGTGAAGCCGCTACACTTGAAGAAAAAAGGCAACGAGGTGGGAAATGA 1782 0.4489 MERQKYPSAYITDKRCKRDREVLSEETEREEVNEEENKTATLFIKTPLPPLFLSLSLTNTRVCCQSHLPLSVAFFVYLYVSLAALHFTLIAGEVVIVLTQSLQVMGCCQSQFSRHSNLPHSNDNVASSPSNGGVDVPAFSEFSLSDLKTATNGFSSDHVVSESGEKAPNVVYKGRLQNHNRRWIAVKRFSKLAWPDPKQFADEAWGVGKLRHQRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWENQTIEWNMRLRVAQSITEALDYCSDQGYPLYHDLNAYRVLFDENGDPRLSCFGLIKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIFSFGTMLLDLLSGKHIPPSHALDMIRGKNIQLLMDSHLEGNFSTEEATVVFDLASQCLQYEPQERPKTKDLVATLSALQTQPDVPSYVMLGIPKREEVPPTPQHPLSQMGDACSRMDLTAIHQILLMTNYRDDEGCNELSFQEWTQQTRDMLEARKRGDLAFRDKDFKTSIECYSQFIDVGTMVSPTVYARRSLCYLFCDQPDAALRDGMQAQCVYPDWSTAFYMQAVALSKLNMNKDAADMLSEAATLEEKRQRGGK* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02522 593 FunFam probable serine/threonine-protein kinase At4g35230 484 593 - -
Rops10g02522 593 FunFam probable serine/threonine-protein kinase At5g41260 236 427 - -
Rops10g02522 593 SUPERFAMILY TPR-like 487 585 IPR011990 GO:0005515
Rops10g02522 593 SUPERFAMILY Protein kinase-like (PK-like) 136 421 IPR011009 -
Rops10g02522 593 Pfam Protein tyrosine and serine/threonine kinase 170 410 IPR001245 GO:0004672|GO:0006468
Rops10g02522 593 Gene3D Tetratricopeptide repeat domain 485 591 IPR011990 GO:0005515
Rops10g02522 593 FunFam probable serine/threonine-protein kinase At4g35230 130 234 - -
Rops10g02522 593 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 106 590 IPR045845 GO:0004672|GO:0009742
Rops10g02522 593 Gene3D Transferase(Phosphotransferase) domain 1 236 426 - -
Rops10g02522 593 ProSiteProfiles Protein kinase domain profile. 157 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g02522 593 Gene3D Phosphorylase Kinase; domain 1 132 234 - -
Rops10g02522 593 Coils Coil 567 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02522 Rops-Chr10 44020298 44026092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02522 138 422 Glycoside Hydrolase AT3G07070 33.861 7.74e-42 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Rops10g02522 PK_Tyr_Ser-Thr 3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02522 K14500 - csin:114315244 856.67