Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02517 ATGAGTTCGCTCTGTGCCCTAGATGAACCGCTGCATTATCACGCTGCTCGCAGAGACGAATCTGTCATTGATGACTACCATGGCTTCAAGATTGCTGATCCTTATCGATGGCTGGAAGATCCTGATGCGGAAGAAGTGAAAGAGTTTGTGGAGAAACAAGTTCAATTGACGAATTCAGTGATTCAAAAATGTGAAACTAGATCGAAGCTCAATGAAGCTATCACCAAGCTATTTGATCATCCTCGTTATGATGCTCCTTTTAGACGATGCAATAAGTACTTTTACTTCCACAACACTGGGCTTCAGCCGCAAGACGTCCTCTATGTGCAGGACAGTTTGGAGGGAGACTCAGAGGTTTTGCTTGATCCCAATACCTTAAGTGAAGACGGAACCGTCGCACTGAGTGCATGCTCAGTGAGTGAAGATGCCAAGCACTTGGCTTATGCGCTTAGTTCAAGTGGTAGCGATTGGATGAATATAAAAGTAACGCGTATCGAGGACAAGAATGTTGAGCCTGATACTCTATCATGGGTCAAGTTTTCCTCTATTAGTTGGACACATGATAGCAAAGGTTTCTTTTATAGCCGCTATCCAGCACCCAAAGATGGAGAAGTAGTAGATGCTGGGACTGAGACCGACGCTAACCTTTATCATGAGCTCTGTTATCATTTTTTGGGTACAGATCAATCACAAGATATTTTGTGCTGGAGAGATCTTGAAAACCCTAAATATTTGTTTGGAGGAAGTGTTACTGATGATGGCAAGTATGTCCTCCTCTATATTGAAGAAGGGTGCGATCCAGTTAACAAACTTTACTACTGTGACTTGTCTGAACTTCCTAATGGACTGGAAAGCTTTCGGAATGAAAATGCCCTCCTCCCATTTGTCAAACTTATTGATAAATTTGATGCAAAATATGAAGTCATTGCAAATGATGATACCTTGTTTACATTTCTAACCAATAAAGATGCTCCAAGATATAAACTAGTCCGGGTAGATTTGAAAGAACCAACTGCTTGGGCCGATGTTCTCCAAGAGTCTGAAAAAGATGTACTTGAGTCGGCATGTGCTGTAAATCATAACCAACTGATAGTGAGTTACTTGAGTGATGTGAAGTATCTTCTACAAGTAAGAGACTTAAAAACAGGTTCCTTGCTGCATCAATTACCAATTGACATTGGCACAGTTGATGGAATTTCTGCACGGCGTGAAGATAGTGTGGTTTTCATTAGCTTTACAAGCTTTCTGACCCCCGGTATCATCTATCAGTGCAACCTGGGAACAGAGATTCCTGATATGAAGATATTTCGTGAAATTGTTGTCCCTGGGTTTGACCGCTCTGCTTTTCATGTTAATCAGGTTTTTTTCTCTAGTAAAGATGGTACCAAGATCCCAATGTTCATTGTTGCCAGAAGGGATATTATTTTGGATGGTTCACACCCTTGTTTGTTATATGGATATGGTGGTTTTAACATCAATCTTACACCATCTTTCAGTGTTAGTCGCATTGTGCTCACAAGACATTTAGGTGTTGTTTTCTGCTTGGCGAATATTCGTGGTGGTGGAGAATATGGGGAGGAATGGCATAAAGCAGGCTCCCTTGCAAAAAAGCAAAATTGCTTTGATGACTTCATTTCTGCAGCTGAATACCTTGTATCTACTGGTTATACCCAACCCAGAAAGTTATGCATCGAAGGTGGAAGCAATGGTGGACTTCTCGTGGGTGCCTGTATTAATCAGAGACCTGATCTGTTTGGCTGCGCACTGGCTCATGTTGGTGTTATGGATATGCTACGGTTCCACAAATTTACCATAGGTCATGCTTGGACCTCAGATTATGGTTGTTCAGACAAAGAGGAAGAGTTTCATTGGCTAATCAAATACTCACCATTACATAATGTCCGGCGACCATGGGAACAACATCCTGATCAGTCAATTCAGTATCCATCAACCATGCTGTTAACAGCTGATCATGATGATCGAGTTGTGCCACTGCACTCATTGAAGCTATTGGCGACCATGCAGTATGTCCTTTGTAGTAGCCTGGAGAAAAGTCCCCAGACAAACCCTATAATTGGTCGCATTGACTGCAAGGCTGGACATGGAGCGGGTCGTCCAACACAGAAAATGATCGATGAAGCTGCTGACCGAGATATGCACAACTGCATTGGAATTGGTGCTGCATTAACCATAAAACCCCCAATAGATGATGCAAAATCCACAAGGAAGGTATTAGATCGGAGAATCTCGGTTGCCGAAAACAAGCAGCAGCTCAAATTGAAGTTGCTCAAGTGTCTTTCTTGGAGTTCCCTCCTCGAATGCAGCAATGATTTGAAGTAA 2340 0.4235 MSSLCALDEPLHYHAARRDESVIDDYHGFKIADPYRWLEDPDAEEVKEFVEKQVQLTNSVIQKCETRSKLNEAITKLFDHPRYDAPFRRCNKYFYFHNTGLQPQDVLYVQDSLEGDSEVLLDPNTLSEDGTVALSACSVSEDAKHLAYALSSSGSDWMNIKVTRIEDKNVEPDTLSWVKFSSISWTHDSKGFFYSRYPAPKDGEVVDAGTETDANLYHELCYHFLGTDQSQDILCWRDLENPKYLFGGSVTDDGKYVLLYIEEGCDPVNKLYYCDLSELPNGLESFRNENALLPFVKLIDKFDAKYEVIANDDTLFTFLTNKDAPRYKLVRVDLKEPTAWADVLQESEKDVLESACAVNHNQLIVSYLSDVKYLLQVRDLKTGSLLHQLPIDIGTVDGISARREDSVVFISFTSFLTPGIIYQCNLGTEIPDMKIFREIVVPGFDRSAFHVNQVFFSSKDGTKIPMFIVARRDIILDGSHPCLLYGYGGFNINLTPSFSVSRIVLTRHLGVVFCLANIRGGGEYGEEWHKAGSLAKKQNCFDDFISAAEYLVSTGYTQPRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTSDYGCSDKEEEFHWLIKYSPLHNVRRPWEQHPDQSIQYPSTMLLTADHDDRVVPLHSLKLLATMQYVLCSSLEKSPQTNPIIGRIDCKAGHGAGRPTQKMIDEAADRDMHNCIGIGAALTIKPPIDDAKSTRKVLDRRISVAENKQQLKLKLLKCLSWSSLLECSNDLK* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02517 779 Gene3D - 81 440 - -
Rops10g02517 779 Coils Coil 735 755 - -
Rops10g02517 779 SUPERFAMILY alpha/beta-Hydrolases 451 675 IPR029058 -
Rops10g02517 779 PANTHER PROLYL ENDOPEPTIDASE 8 717 - -
Rops10g02517 779 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 16 429 IPR023302 GO:0004252
Rops10g02517 779 ProSitePatterns Prolyl endopeptidase family serine active site. 543 573 IPR002471 GO:0004252|GO:0006508
Rops10g02517 779 Gene3D alpha/beta hydrolase 22 717 IPR029058 -
Rops10g02517 779 Pfam Prolyl oligopeptidase family 496 716 IPR001375 GO:0006508|GO:0008236
Rops10g02517 779 FunFam Prolyl endopeptidase 81 440 - -
Rops10g02517 779 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 566 586 IPR002470 GO:0004252|GO:0006508
Rops10g02517 779 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 648 670 IPR002470 GO:0004252|GO:0006508
Rops10g02517 779 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 481 499 IPR002470 GO:0004252|GO:0006508
Rops10g02517 779 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 536 555 IPR002470 GO:0004252|GO:0006508
Rops10g02517 779 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 508 532 IPR002470 GO:0004252|GO:0006508
Rops10g02517 779 FunFam Prolyl endopeptidase 402 719 - -
Rops10g02517 779 SUPERFAMILY Peptidase/esterase 'gauge' domain 15 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02517 Rops-Chr10 43951914 43958008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02517 481 613 Carbohydrate Esterase AT5G36210 30.496 7.72e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02517 K01322 - gmx:100776544 1315.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02517 10 43951914 43958008 Rops10g02517 10 43951914 43958008 ECH
Rops9g02559 9 47949748 47954427 Rops10g02517 10 43951914 43958008 PCT