Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02513 ATGGTATGTGGTATCTGGTTTCTGGTGGGTGTTGGTGACTTGGAATCTGTACTTGTATATATGGGAGATACAGAGAGTTGCAGTAGCAGAGTTTTGAATTATGGGTGGAATCAAAGTCGAAAGCAGAGGCAGAAGGTTGAAGTTTACAACGAGGTTCTTAGTCGACTTAGGGAATTGAATGTCCCAGAGGCTGTGGTTCCTGGTTTTGAGGATGAGCTTTGGGCGCACTTCTATCGTCTTCCAACTAGGTATGCATTGGATATGAATGTGGAGAGGGCCCAAGATGTTCTTATGCATAAAAGTTTACTGCACATCGCACGAAACCCAGCTATACCAACAGGACCTGCAGTTGAAGTTCGTCTTGTACAGGTTCGTTTTGCTTCTGGTGTGAGTTGTAATAAATCCCTTCCCTCAAACTTACAAAGTAAAGTCTGTCCTCAAGATTCTGATATTCCAGGCAACATAAGCTCCCATCCTCCCCCAGTCTTTGGTTCATCAACTAATGGGGAACTTGTTCTTGGTGCAAGCCAGCCTATGCATGAAATCACAATTTCAACAAATGACAAGCAAAAACTTCTCAGTCAGTTAACTTCCTTACTGTCTGAGATTGGGCTGGACATTCAGGAAGCACATGCTTTTTCCACACTGGATGGCTATTCATTAGATGTTTTTGTTGTTGGTGGTTGGGCAGTTGAGGAGACAGAGAAGTTGAAGCGCGTACTGGCAAAGAAAATTCAGAAACTTGAGAAGCAACCTCAGTTGAAAGAAAATGGCGGTCTTCCTCTTGCAGAGCAAGAGCAAACCGGAATGAACTTCATCTCTAGACATGTGAATTCGCCCACTTGTGAAAATGATGCCTCAAAAATTGATGCAACGTGTTTGAGATATGACAAGAAAATTGCATCTGGGCCTTTCAATGATTTGTACAAAGGTACGTTCTGTAATCAAGATGTAGCTATCAAAGTCCTCAAGAATGAGAATTTGAATGAAAATATACTGAGGGAGTTTGCTCAGGAAGTCTATATCCTAAGTAAAATTCATCACAAGAATGTTATCAAATTTGTTGGCGCTTGTACAAAACCCCCAAACCTTTACCTTGTTACAGAATATTTGTCTGGTGGAAGTATGTACGACTTTCTGCATATACAGAAGACTCTCCTTGCTCTTCCATCTTTGCTCAAAGTAGCCATTGATGTTTCCGAAGGAATGAAATATTTGCATCAAAATGATATCATACATCGGGACCTCAAGACGGCTAATCTTTTGATAGATGAGAATGGGGTAGTTAAGGTTGCTGATTTTGGTGTAGCCAGAGTGCACCATCAGTCTGGTATCATGACTGCAGAAACCGGAACTTATCGGTGGATGGCTCCAGAGGTTATTGAACATAAACCATATGATCACAAAGCAGATGTCTTTAGCTTTTCCATTGTTCTTTGGGAGCTGCTCACAGGAAAGCTTCCTCATGAGCATCTGTCCCCATTGCAAGCAGCAGTTGGAGTGGTCCAGAAGGGTTTAAGGCCTAATATTCCAAGGCATACTCATCCAAAGTTAGTGGAATTGCTTCACTGGTGCTGGCACCAAGATCCATCTTTGAGACCCAATTTCTCACAAATTCTGGAATTTCTGCTGCACTTGACCAAGACGGCGACGGCATGGGAATGA 1665 0.4246 MVCGIWFLVGVGDLESVLVYMGDTESCSSRVLNYGWNQSRKQRQKVEVYNEVLSRLRELNVPEAVVPGFEDELWAHFYRLPTRYALDMNVERAQDVLMHKSLLHIARNPAIPTGPAVEVRLVQVRFASGVSCNKSLPSNLQSKVCPQDSDIPGNISSHPPPVFGSSTNGELVLGASQPMHEITISTNDKQKLLSQLTSLLSEIGLDIQEAHAFSTLDGYSLDVFVVGGWAVEETEKLKRVLAKKIQKLEKQPQLKENGGLPLAEQEQTGMNFISRHVNSPTCENDASKIDATCLRYDKKIASGPFNDLYKGTFCNQDVAIKVLKNENLNENILREFAQEVYILSKIHHKNVIKFVGACTKPPNLYLVTEYLSGGSMYDFLHIQKTLLALPSLLKVAIDVSEGMKYLHQNDIIHRDLKTANLLIDENGVVKVADFGVARVHHQSGIMTAETGTYRWMAPEVIEHKPYDHKADVFSFSIVLWELLTGKLPHEHLSPLQAAVGVVQKGLRPNIPRHTHPKLVELLHWCWHQDPSLRPNFSQILEFLLHLTKTATAWE* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02513 554 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 169 543 - -
Rops10g02513 554 Coils Coil 231 251 - -
Rops10g02513 554 SUPERFAMILY ACT-like 179 251 IPR045865 -
Rops10g02513 554 FunFam Kinase suppressor of Ras 1 283 371 - -
Rops10g02513 554 ProSiteProfiles Protein kinase domain profile. 294 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g02513 554 SUPERFAMILY Protein kinase-like (PK-like) 282 543 IPR011009 -
Rops10g02513 554 SMART serkin_6 294 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops10g02513 554 ProSiteProfiles ACT domain profile. 181 257 IPR002912 -
Rops10g02513 554 CDD STKc_MAP3K-like 300 543 - -
Rops10g02513 554 Gene3D Phosphorylase Kinase; domain 1 284 370 - -
Rops10g02513 554 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Rops10g02513 554 Pfam Protein tyrosine and serine/threonine kinase 295 543 IPR001245 GO:0004672|GO:0006468
Rops10g02513 554 Gene3D Transferase(Phosphotransferase) domain 1 372 553 - -
Rops10g02513 554 PRINTS Tyrosine kinase catalytic domain signature 451 461 IPR001245 GO:0004672|GO:0006468
Rops10g02513 554 PRINTS Tyrosine kinase catalytic domain signature 470 492 IPR001245 GO:0004672|GO:0006468
Rops10g02513 554 PRINTS Tyrosine kinase catalytic domain signature 514 536 IPR001245 GO:0004672|GO:0006468
Rops10g02513 554 PRINTS Tyrosine kinase catalytic domain signature 368 381 IPR001245 GO:0004672|GO:0006468
Rops10g02513 554 PRINTS Tyrosine kinase catalytic domain signature 405 423 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02513 Rops-Chr10 43847450 43858691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02513 25 548 MAP Kinase Kinase Kinase AT4G35780 56.618 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Rops10g02513 PK_Tyr_Ser-Thr 2.1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02513 - - gmx:100818047 837.795