Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02512 ATGGCCCAAAGAGAAGAAGTTGTGGTTGATTTTGGAGGCAATTGCAAAGAAGAAAATCTAGCATCACAATTAAGTGGCAGGGCTTCAAGTGACAAACTTCAAGATATGCAGGAAAAACCCAAAGGTGAGTCTGCTGCACAAACGAGGAAGCAAGATCGACAGAACCAAGAAAACCAACAACAATCTTGGTGTTCAGCAGAAAATGTTGTAAGGTCCACTTCAAATGATTTAACCCCACGATACTCATGGAGATCATCAATAAGCAGAACAAAGTCAAGGCTGATTGACCCACCAGAGGAATCATGTGCAGGTTCAGAATCTGGAAGACAACTAGTGCTAGAGGATGATAATGATCTTGAGGTGGAGGACATGCCAGAAGTTTATAAGCGAATGAAGTTTGGTGCTTTCTCAGTGCTTCAATGGGTTTGTCTTGCTTCAATAATAGTAGCCTTGGTTTCTAACCTTTGGATTTCATACTTACAAAGGCTTAAACTCTGGGACCTTCCCCTTTGGGAATGGGAGATAATGATTTTGGTACTAATTTGTGGACGTTTAGTCTCTGGTTGGGTAATCAAAGTAATTGTGCTTTTTGTGGAACGAAATTTTATACTAAGAAAACGGGTTCTGTATTTTGTTTATGGGCTGAAGAGTTCTGTGAAGAACTGTATCTGGTTGGGTCTGGTTTTACTTGTTTGGCACTTTATTTTGATCAGTACAGTGCAGAAGAAGATTAACGATAAAATTTTGTGTTATGTGACCAAAGTTCTGGTATTTCTGTTCATTGGCACTCTTATATGGCTTGTCAAAACCATTTTCGTTAAGGTCTTTGCTTTGTACTTTCATCTGAATACATACTTTGAACGGATTAGGGAAGCTCTGTTCAGACAATATGTAATTGAAAAGCTCTCTTGTCATCCGTTGAAAGAAGAGGAAGCTGAAGATGGATCTAATGAGCACTTGGTTTCTGTGAGAAGCTCGAGACTTAGGAGGGCGAGAATGCAAAAGGGTTCCTTTACTGTGAAAAGTTGCGAGTTGGAAAGGTCGTTGTCTAATGATAAGAAACAAGAAGAAGAAATGTCAATTGACCAATTGCATAAGTTGAATAGGAGAAATATATCAGCTTGGAATATGAAGAGGATGATTAACATTATTATGCATGGGGCATTTACAACTCTGGATGAGCGTTTGTTGAATTCAGATATTGAAGATGAGTCTTTGCTGCAAATTAGAAGCGAATGTCAGGCAAAGCAGACTGCTCGGACAATATTTCAGAAAGTGGCACAGCCAGGATCCCAGTATATTTTCTTGCAAGATGTGATGCAGTTTATGCGAAAAGATGAAGCTTTGAAGACCATGGATCTGTTGGGAGCAGGGTGTCCAAACCAGGGCATTAGCATGTTCGCTCTTAGAGAATGGATGGTGAATGCGTTCAGAGAGAGAAGGGCACTGGCATTATCACTCAGAGACACAAAAACTGCAGTGGATGAGCTCCATAATATGCTGAATGTCATTGTTGGTTTTGTTATTTTGATAGTCTGGCTTGTTATACTTGGAACTCCAATCCTACACTTCGTTGTCTTCATGGGATCCCAGCTTCTGTTGGCAGTATTTGTGTTCGGGAATACTTGTAGGACTGTCTTTGAAGTAATCATCTTCTTATTTGTGATGCACCCATTTGATGTTGGTGATCGTTGTGAAGTAGATGGAGTTCAGATGGTAGTGGACGAGTTGAATATACTAACAACAGTGTTTTTGAAGTATGATAACCAAAAAGTTTCATACCCAAACAGTGTTTTAGCTACCAAACCCATCAGTAATTATCAGCGTAGTCCAGATATGGGAGATGCAATCGATTTCTGTATCCATATCTCCACTCCATTAGAGAAAGTTGCAGCTATGAAAAGAAGAATTATAGAGTATATTGAGAGGAAGAATGAGCACTGGCATCAGGGTCCAGTGGTGATCATGAAGGATGTGGAAGACTTGAACAAATTGAACATGTCAGTGTGGGTTACACACAAAATGAATTATCAGGACATCATAGAAAGATGGAACAGGAGAGGCCAGTTGATTGAAGAGATGATCCAAGTGTTCAAGGAACTTGATGTTGAATACAGGCTTCTTCCTCTTGATGTCAATGTCCGATATGTGCCCCCTATGCATTCCAATGGGCTTCTTCCATCCAATTGGAACAATTGTGCCAGCCCTCTCCCTTAG 2217 0.4023 MAQREEVVVDFGGNCKEENLASQLSGRASSDKLQDMQEKPKGESAAQTRKQDRQNQENQQQSWCSAENVVRSTSNDLTPRYSWRSSISRTKSRLIDPPEESCAGSESGRQLVLEDDNDLEVEDMPEVYKRMKFGAFSVLQWVCLASIIVALVSNLWISYLQRLKLWDLPLWEWEIMILVLICGRLVSGWVIKVIVLFVERNFILRKRVLYFVYGLKSSVKNCIWLGLVLLVWHFILISTVQKKINDKILCYVTKVLVFLFIGTLIWLVKTIFVKVFALYFHLNTYFERIREALFRQYVIEKLSCHPLKEEEAEDGSNEHLVSVRSSRLRRARMQKGSFTVKSCELERSLSNDKKQEEEMSIDQLHKLNRRNISAWNMKRMINIIMHGAFTTLDERLLNSDIEDESLLQIRSECQAKQTARTIFQKVAQPGSQYIFLQDVMQFMRKDEALKTMDLLGAGCPNQGISMFALREWMVNAFRERRALALSLRDTKTAVDELHNMLNVIVGFVILIVWLVILGTPILHFVVFMGSQLLLAVFVFGNTCRTVFEVIIFLFVMHPFDVGDRCEVDGVQMVVDELNILTTVFLKYDNQKVSYPNSVLATKPISNYQRSPDMGDAIDFCIHISTPLEKVAAMKRRIIEYIERKNEHWHQGPVVIMKDVEDLNKLNMSVWVTHKMNYQDIIERWNRRGQLIEEMIQVFKELDVEYRLLPLDVNVRYVPPMHSNGLLPSNWNNCASPLP* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02512 738 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 30 730 IPR016688 -
Rops10g02512 738 FunFam Predicted mechanosensitive ion channel 558 607 - -
Rops10g02512 738 MobiDBLite consensus disorder prediction 32 50 - -
Rops10g02512 738 SUPERFAMILY Sm-like ribonucleoproteins 550 607 IPR010920 -
Rops10g02512 738 Gene3D - 558 607 IPR023408 -
Rops10g02512 738 MobiDBLite consensus disorder prediction 51 65 - -
Rops10g02512 738 PIRSF Memb_At2g17000 11 734 IPR016688 -
Rops10g02512 738 Pfam Mechanosensitive ion channel 499 704 IPR006685 GO:0016020|GO:0055085
Rops10g02512 738 MobiDBLite consensus disorder prediction 18 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02512 Rops-Chr10 43841686 43844972 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02512 2 731 Mechanosensitive Ion Channel Family AT1G53470 44.250 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02512 K22048 - cave:132190409 878.241