Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02507 ATGACGAAATCGGACACCGTGGTTTACCTTCATGGGAACCTGGATTTGAAAATCGTGGAGGCAAGGTTTTTGCCAAACATGGACTTGTTTTCAGAGCGTATTCGTAGATTCTTCTCCGCTCTCAACACGTGCAGTGCTTCCATCGCCGGTAAAAAGAAACGTCATCATTCACGCCACCGTCACCACAAGATCATCACCAGTGATCCTTACGTCACCGTTTGCCTCGCCGGTGCCACCGTGGCACGAACTCGCGTCATCTCCAACTCTCAGAACCCAACGTGGAACGAGAATTTCAAGATCCCGTTGGCTCACCCTGTCTCTCAGGTTGAGTTCTACGTTAAAGACAATGACATGTTCGGTGCCGATTTGATCGGAATCGCCACCGTCTCCGCCGCCAAGATCTTATCCGGTGAAGTTAGTAGTGATTGGTTTCCGGTTATAGGTTCGTTCGGGAAGCCTCCGAAACCTGATTGCGCCGTTCGCCTCGAGATGAAATTCACGAGGTGTGAGGATAGTCCTCTGTATCGCTCACCAGATCCGGATCGGTTCGTGGTTCGGGATTCGTACTTTCCGGTTCGGCATGGAGGATCGGTGACACTGTATCAGGATGCGCACGTGCCTGAATCGATGTTACCGGAGGTTGAATTGGACGATGGGGTTGTGTTTCAGCAAGGGCAGTGCTGGGAAGATATATGTCACGCAATTTTGGAAGCGCATCATTTGGTTTACATCGTGGGTTGGTCCATTTACCACAAGGTGAAGTTGGTTCGTGAGCCCACAAAACCTTTACCGAGCGGTGGGAACTTGAATTTGGGGGAGTTGCTCAAGTACAAGTCCGAAGAAGGTTTAAGAGTTTTGCTATTGGTTTGGGATGACAAGACTTCGCACAGTAAATTTTTCATTCACACGGATGGAATAATGCAAACCCATGATGAAGAAACTAAAAAGTTTTTCAAGCATTCTTCAGTTTCATGTGTGCTCGCACCTCGATATGCCAGCAGTAAGCTTAGCATTTTCAAGCAGCAGGTTGTTGGAACGCTCTTTACGCATCATCAGAAATGTGTGATTGTTGATAGTCAAGCACATGGCAATAATCGGAAGATAACTGCATTTATAGGGGGTCTGGATCTTTGTGATGGCCGGTATGATACACCTGAGCATAGAATTTTCCGTGATCTTGACACTATTTATCAGGATGATTATCATAATCCCACATTTTGTGCTGGAACCAAGGGTCCAAGGCAACCATGGCACGATTTACATTGCAAAATTGAAGGCCCTGCGGCATATGATATACTCACTAATTTTGAGCAGCGCTGGAGAAAAGCCACTAAATGGTCTGAGTTGGGTCAAAAATTCAAGAGAGTATCTCACTGGCATGATGATTCTTTGATTAAGTTAGAACGCATCTCTTGGATTCTTAGTCCTTCTCAATCAATTCCAAATGATGATCCTGAATTATGGGTTTCAAAGGAAGATGACCCCAAAAATTGGCATGTTCAGGTTTTTCGATCCATAGATTCTGGCTCTTTGAAAGGATTTCCTAAGGATGTATTAGAAGCTGAGGCTCAGAACCTTGTTTGTGCGAAAAATTTGGTCATAGACAAGAGTATTCAAACAGCCTACATACATGCCATCAGATCTGCTCAACATTTTATTTATATCGAGAATCAATATTTCCTCGGATCATCCTTTGCTTGGCCATCTTACAAAGAAGCAGGTGCTGATAACTTGATTCCTATAGAATTGGCACTGAAGATAGTCAGCAAGATAAGATCCAAAGAGAGATTTACGGTTTATATTGTCATCCCAATGTGGCCTGAAGGTGTCCCTTCTTCCGCCACTGTGCAAGAGATTCTCTTTTGGCAGGGACAAACTATGCAAATGATGTACGAAGTCATAGCTCGAGAGTTGAAGTCTATGCACCTTGACAATAGCCATCCACAAGATTACCTCAATTTTTACTGTCTTGGAAACCGAGAGAAGTTGACAACTGAAGTTTCAGGTTCAAATAATTCACCTTCAGATAATTGCGACTCGGTTTCAACTTCACAAAAGTTCCAACGATTTATGGTTTATGTGCACGCCAAGGGAATGATTGTGGATGATGAATATGTGATAATTGGGTCTGCCAATATCAATCAACGATCTTTGGCTGGATCAAGAGATACTGAGATAGCAATGGGTGCATATCAACCCCATCATACATGGAGTAAAAAAGGGAGACATCCATATGGTCAGGTATATGGGTATAGAATGTCCTTGTGGGCAGAACACATGGGGTGCACACATGCTTGTTTCAAGGAGCCTGAAAGTTTGGATTGTGTGAAGAGTGTGAACAAGATTGCTGAAGATAACTGGAAGAACTACACTGCTGAAGATTTTACCCCATTGCAAGGGCACCTTATGAAATACCCTGTCAATGTAGATGCAAATGGGAAGGTAAGCTCCTTACCTGGATTTGAGTCATTCCCTGATGTTGGCGGCAAGGTGCTTGGCTCTCGTTCTACCCTTCCTGATGCTCTAACTACATAG 2535 0.4426 MTKSDTVVYLHGNLDLKIVEARFLPNMDLFSERIRRFFSALNTCSASIAGKKKRHHSRHRHHKIITSDPYVTVCLAGATVARTRVISNSQNPTWNENFKIPLAHPVSQVEFYVKDNDMFGADLIGIATVSAAKILSGEVSSDWFPVIGSFGKPPKPDCAVRLEMKFTRCEDSPLYRSPDPDRFVVRDSYFPVRHGGSVTLYQDAHVPESMLPEVELDDGVVFQQGQCWEDICHAILEAHHLVYIVGWSIYHKVKLVREPTKPLPSGGNLNLGELLKYKSEEGLRVLLLVWDDKTSHSKFFIHTDGIMQTHDEETKKFFKHSSVSCVLAPRYASSKLSIFKQQVVGTLFTHHQKCVIVDSQAHGNNRKITAFIGGLDLCDGRYDTPEHRIFRDLDTIYQDDYHNPTFCAGTKGPRQPWHDLHCKIEGPAAYDILTNFEQRWRKATKWSELGQKFKRVSHWHDDSLIKLERISWILSPSQSIPNDDPELWVSKEDDPKNWHVQVFRSIDSGSLKGFPKDVLEAEAQNLVCAKNLVIDKSIQTAYIHAIRSAQHFIYIENQYFLGSSFAWPSYKEAGADNLIPIELALKIVSKIRSKERFTVYIVIPMWPEGVPSSATVQEILFWQGQTMQMMYEVIARELKSMHLDNSHPQDYLNFYCLGNREKLTTEVSGSNNSPSDNCDSVSTSQKFQRFMVYVHAKGMIVDDEYVIIGSANINQRSLAGSRDTEIAMGAYQPHHTWSKKGRHPYGQVYGYRMSLWAEHMGCTHACFKEPESLDCVKSVNKIAEDNWKNYTAEDFTPLQGHLMKYPVNVDANGKVSSLPGFESFPDVGGKVLGSRSTLPDALTT* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02507 844 FunFam Phospholipase D delta 218 462 - -
Rops10g02507 844 SMART pld_4 346 381 IPR001736 GO:0003824
Rops10g02507 844 SMART pld_4 690 717 IPR001736 GO:0003824
Rops10g02507 844 ProSiteProfiles C2 domain profile. 1 144 IPR000008 -
Rops10g02507 844 Pfam C2 domain 12 146 IPR000008 -
Rops10g02507 844 SUPERFAMILY Phospholipase D/nuclease 173 452 - -
Rops10g02507 844 CDD C2_plant_PLD 7 167 - -
Rops10g02507 844 Pfam PLD-like domain 543 726 IPR025202 -
Rops10g02507 844 Pfam Phospholipase D Active site motif 347 381 IPR001736 GO:0003824
Rops10g02507 844 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 690 717 IPR001736 GO:0003824
Rops10g02507 844 Gene3D Endonuclease Chain A 510 738 - -
Rops10g02507 844 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 346 381 IPR001736 GO:0003824
Rops10g02507 844 PIRSF PLD_plant 1 844 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Rops10g02507 844 Pfam Phospholipase D C terminal 765 834 IPR024632 -
Rops10g02507 844 FunFam Phospholipase D 505 736 - -
Rops10g02507 844 Gene3D C2 domain 10 173 IPR035892 -
Rops10g02507 844 SUPERFAMILY Phospholipase D/nuclease 538 775 - -
Rops10g02507 844 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 10 166 IPR035892 -
Rops10g02507 844 Gene3D Endonuclease Chain A 220 464 - -
Rops10g02507 844 PANTHER PHOSPHOLIPASE D 2 835 IPR015679 -
Rops10g02507 844 SMART C2_3c 13 143 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02507 Rops-Chr10 43733788 43742567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02507 4 673 Phospholipase D Gene Family (Wang group) AT4G35790 65.747 0.0 946
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02507 K01115 - gmx:100795859 1554.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02507 10 43733788 43742567 Rops10g02507 10 43733788 43742567 ECH