Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02489 ATGTCACAAACCTACCTACCCTGTCTCCTTCCACAGTTCCCCAAACCCCATAGCAAATCCAATGAAGAAGTGTGGAAGGACATAAAACTTGCCTCTCTTTGTAACTGCTCCATGGACATGTTCACTACCCCTTCTTTCTTTCTCAACACCAGAGGACCCTTTAACAATGACTCGTCAAGTGCCTGTAATTTGAAGCAAGCTCAACCAGCTTTTCTTCCCCTCTGTTCTAGTTCAATCTTTCAGAAACAGGGTCATCGCCCTTTCCTTTCTTCGGATAATAACACTTCATTTGATGATTCAGAATCTTCCAAAATAAGCCCCGAGAAAAGGGTTCAACAAGGTATCTATTCCTTAGCGGATCAACGACATAAGCGTATGATGAAGAATCGAGAATCTGCTGCTTATAAAAAAGCGTTGGAAGTGAAGCTTGTTTGTTTAACGGAAGAGAATTCTAGACTGAAAAGACAAGTGGAAGAGTTGCAGTTCTGCTTATCGTCCTCTGCTAAGCCTCCCAAAATGGGCACTTTGTATAGAACCACATCTTCTCCATTTTGA 555 0.4216 MSQTYLPCLLPQFPKPHSKSNEEVWKDIKLASLCNCSMDMFTTPSFFLNTRGPFNNDSSSACNLKQAQPAFLPLCSSSIFQKQGHRPFLSSDNNTSFDDSESSKISPEKRVQQGIYSLADQRHKRMMKNRESAAYKKALEVKLVCLTEENSRLKRQVEELQFCLSSSAKPPKMGTLYRTTSSPF* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02489 184 Coils Coil 136 156 - -
Rops10g02489 184 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 13 181 IPR043452 GO:0003700|GO:0045893
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02489 19 184 bZIP Transcription Factor Family AT3G56850 29.327 5.95e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02489 K14432 - lja:Lj1g3v2216450.1 129.798