Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02488 ATGAAAAGAAATCCAGTTTTATTGCTATTATTCTACTCTCTCTTCCTGTATCTTGGGAAGATCTCTCAAGCAGGGAATGGTAGTAGTGACAATGGAGTTTACATTGTGTATATGGGAGCCACGGATTCAACAAACGCTTCCCTTCGGAGGGACCACGCTCATGTTCTGGACTTGGTGCTAAGAAGGAATGACAAGGCTCTAGTCCGCAACTATAGATATGGTTTCTCAGGCTTTGCAGCACGTTTATCGAAAAAGGAGGCAAGCTCAATTGCTGAGGAACCTGGAGTGGTGTCTGTCTTCCCTGACCCTATTATTAAGCTCCACACAACACGTTCTTGGGATTTCCTCAAGTACCAAACTCACGTCAAAATTGACGCAGTCTCCAATTCTTCTTCCTCATCTGACATCGTCATTGGCATCTTAGACACAGGTATATGGCCTGAGGCAGCAAGTTTTTCGGACAAGGGTATGGATCCTGTTCCATCCAGCTGGAAAGGCACCTGCATGAAATCACAAGACTTCAATTCATCAAACTGTAACAGGAAGCTAATTGGAGCAAGGTATTACAGTGACCCTGATGGGGACGATGACGAGGCCGACACAGCAAGGGATACGATTGGGCATGGGACCCACGTGGCGTCCACGGCTGCTGGGGCCACCGTGACTGATGCATCATTCTATGGTCTTGCGGCGGGGACGGCCAAAGGTGGGTCCCCAGAATCAAGGTTGGCAGTTTACAGAGTGTGCTCCGACTTTGGGTGCCCTGGCTCTGCCATACTTGCGGCTTTCGATGATGCCATTGCTGATGGAGTGGATGTGCTATCGCTCTCGCTTGGTGCGGCTTCCTTTCTCCGACCCGATTTGACAACGGACCCTATTGCCATCGGAGCCTTCCACGCCGTGGAGCGCGGCATCGTGGTGGTCTGCTCTGCCGGAAATGATGGACCGTCCCCAAACACGGTTGTCAACGACGCTCCTTGGATTTTAACCGTTGCAGCCACCACCATCGACCGGGATTTTCAATCTAACGTTGTGCTGGGTGGTAACAAAGTGATCAAGGGCAAAGCCATAAATTTCTCCCCGCTTTCAAATTCCCCCGAGTATCCACTGATAAGCGGCGAGTCTGCCAAGGCGAGTAGCGCTAGCTTAGTAGCAGCAAGTCAGTGCCACCAAGAATCATTAGATGGGAGTAAAGTCAAAGGAAAGATTGTCGTCTGCAATGGCAAAGATGATGATGAATATCCAACTAGTATAGTACTTGACACTGTCAAAAATGTGGGAGGCTTAGGTGTTGTTCATATTACTGACCAAAATGGAGCAGTAGTACCAAATTATGGTGACTTCCCAGCAACAGTGATAAGTACTAAGGATGCCCCAGCAATCCTCCAGTATGTCAATTCAACCAGCAATCCAGTGGCAACTATTCTACCAACAGTTTCTGTCATTGATTATAAGCCTGCACCCATGGTTGCATACTTTTCAGCCAGAGGACCTTCAACCCTTTCAAGGAATATTCTCAAGCCTGATATTGCAGCACCAGGAGTTAACATTATTGCAGCATGGATTGGCAATGACGCACAAGATGTTCCAAAAGGAAAAATTCCCTCGAATTACAACATCATCTCAGGGACTTCCATGGCATGTCCACATGTTTCAGGCTTAGCAGGCAGCATCAAATCTCGGAACCCCACTTGGAGTGCCTCTGCTATTAGATCAGCCATCATGACCTCTGCAACTCAAATCAACAATTTGAAGGCTCCCATAACAACGGATTCAGGGTCAGTAGCCACCCCTTATGACTACGGAGCAGGGGAAATGACAACATCTGAACCATTGCAACCAGGGCTAGTTTACGAAACCAGCACCATTGACTACTTGAATTACTTATGTTACACTGGACTCAATATAACCACAGTTAAGGTCATCTCCAGAACTGTCCCTGATAGTTTCAGTTGTCCCAAGGATTTGAGTCCTGATCATATTTCCGACATCAACTATCCTTCCATTGCAATCTCCAACTTCACTGGGAAAGGAGCCGTGAACGTGAGTAGAACTGTCACTAACGTTGGTGAAGAGGACGAAACGGTATACTCCCCCGTTGTCGATGCTCCAAATGGGATAAATGTCAAACTAATTCCAGATAAACTTCAATTTACGAAAAGTAGTAAAAAGCAAAGCTACCAAGTTATTTTCTCCTTGACTTCGACCTCGTTGAAGGAAGATCTGTTTGGATCCATTACCTGGAGTAATGGTAAATATACTGTTCGAAGTCCTTTTGTATTAGCAAAGTAG 2292 0.4668 MKRNPVLLLLFYSLFLYLGKISQAGNGSSDNGVYIVYMGATDSTNASLRRDHAHVLDLVLRRNDKALVRNYRYGFSGFAARLSKKEASSIAEEPGVVSVFPDPIIKLHTTRSWDFLKYQTHVKIDAVSNSSSSSDIVIGILDTGIWPEAASFSDKGMDPVPSSWKGTCMKSQDFNSSNCNRKLIGARYYSDPDGDDDEADTARDTIGHGTHVASTAAGATVTDASFYGLAAGTAKGGSPESRLAVYRVCSDFGCPGSAILAAFDDAIADGVDVLSLSLGAASFLRPDLTTDPIAIGAFHAVERGIVVVCSAGNDGPSPNTVVNDAPWILTVAATTIDRDFQSNVVLGGNKVIKGKAINFSPLSNSPEYPLISGESAKASSASLVAASQCHQESLDGSKVKGKIVVCNGKDDDEYPTSIVLDTVKNVGGLGVVHITDQNGAVVPNYGDFPATVISTKDAPAILQYVNSTSNPVATILPTVSVIDYKPAPMVAYFSARGPSTLSRNILKPDIAAPGVNIIAAWIGNDAQDVPKGKIPSNYNIISGTSMACPHVSGLAGSIKSRNPTWSASAIRSAIMTSATQINNLKAPITTDSGSVATPYDYGAGEMTTSEPLQPGLVYETSTIDYLNYLCYTGLNITTVKVISRTVPDSFSCPKDLSPDHISDINYPSIAISNFTGKGAVNVSRTVTNVGEEDETVYSPVVDAPNGINVKLIPDKLQFTKSSKKQSYQVIFSLTSTSLKEDLFGSITWSNGKYTVRSPFVLAK* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02488 763 SUPERFAMILY Subtilisin-like 122 606 IPR036852 GO:0004252|GO:0006508
Rops10g02488 763 Pfam Fibronectin type-III domain 663 760 IPR041469 -
Rops10g02488 763 ProSitePatterns Serine proteases, subtilase family, histidine active site. 208 218 IPR022398 -
Rops10g02488 763 Gene3D Peptidase S8/S53 domain 135 625 IPR036852 GO:0004252|GO:0006508
Rops10g02488 763 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 760 IPR045051 -
Rops10g02488 763 FunFam Subtilisin-like protease SBT1.5 135 348 - -
Rops10g02488 763 CDD PA_subtilisin_like 343 475 - -
Rops10g02488 763 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Rops10g02488 763 ProSiteProfiles Serine proteases, subtilase domain profile. 112 612 - -
Rops10g02488 763 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 108 IPR037045 -
Rops10g02488 763 CDD Peptidases_S8_3 106 579 IPR034197 -
Rops10g02488 763 Gene3D - 337 482 - -
Rops10g02488 763 Gene3D - 629 763 - -
Rops10g02488 763 FunFam subtilisin-like protease SBT1.5 337 482 - -
Rops10g02488 763 Pfam Peptidase inhibitor I9 33 108 IPR010259 -
Rops10g02488 763 Pfam Subtilase family 133 604 IPR000209 GO:0006508|GO:0008236
Rops10g02488 763 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Rops10g02488 763 PRINTS Subtilisin serine protease family (S8) signature 204 217 IPR015500 -
Rops10g02488 763 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02488 Rops-Chr10 43434045 43447713 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02488 18 761 Subtilisin-like Serine Gene Family AT1G20150 52.694 0.0 767
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02488 K25898 - gmx:100820194 1168.68