Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02487 ATGAAAGGAAATTCTGTTCCATTGCTATTATTCTACTCTCTTTTCCTGTTTCTTGGAGAGATCATTGAAGCGGGGAATGGAATTAGTGATGACACTAACCGTAATGAAGATGGAGTTTATATTGTGTATATGGGAGCCGCGGATTCCACAAATGCTTCCCTTCGACGTGACCACGCACATGTTCTGGACTTGGTGCTAAGAAGGAATGAGAAGGCTCTAGTACGCAACTACAGACATGGTTTCTCAGGCTTCGCAGCTCGTCTATCGAAAAAGGAGGCAAGCTTAATTGCTATGGAACCTGGAGTGGTGTCTGTCTTCCCTGACCCCATTCTGAAGCTCCACACAACACGCTCTTGGGATTTCCTCTATCACCAAACTCACGTCAAAATCAACGCCGTCTCCAATTTTTCATCCTCATCTGACGTTGTCATTGGCATCATAGACACAGGTATATGGCCAGAGGCGGCAAGTTTTTTGGACAAGGGTATGGGTCCCGTTCCATCCCGTTGGAAAGGCACCTGCATGAAATCACAAGACTTCAACTCATCTAACTGTAACAGGAAGCTAATCGGAGCAAGGTACTACCCCGGTCCATTTGGGGCCGACACAGCAAGGGATACGATTGGGCATGGGACCCACGTGGCGTCCACGGCGGTGGGGGCAACCGTGACTGATGCATCATACTATGGTCTCGCGGCGGGGACTGCCAAAGGTGGGTCCACAGAATCAAGGTTGGCAGTTTACAGAGTGTGCTCCAACATTGGGTGCCCTGGCTCAGCCATACTTGCGGCATTCGATGATGCCATTGCTGATGGAGTGGACGTTCTATCACTCTCGCTTGGTTCGTCCTCCAGGCTCCTACCCGATTTGAAATCGGACCCTATTGCCATCGGAGCCTTCCACGCTGTGGAGCGCGGCATCGTGGTGGTCTGCTCCGCCGGGAATGAGGGACCCACCCCAAACACGGTTGTCAATGACGCTCCTTGGATTTTAACTGTTGCAGCCACCACCATTGATCGGGATTTTCAATCTAACGTTGTCTTGGGTAGTAACAAAGTGATCAAGGGCGAAGCCATAAATTTCTCCCCACTTTCAAGTTCCCCCGACTATCCACTGATATATGGTGAGTCTGCCAAGGCAAGTAGCGCTGGCTTAGTTGAAGCAAGGCGGTGCCACCCAAATTCATTAGATGGGAGTAAAGTCAAAGGAAAGATTGTCATCTGCAATGGCAAAGATGATGATGAATATCCAACTAGTCTAATAGTTGACACTGTCAAAAATGTGGGAGGCTTAGGTGTTGTTCATATTACTGACCGAAATGGAGCAGTAGTATCAAAATATGGGGAATTCCCAGCAACAGTGGTAAGTTCTAAAGATGCCCCCACAATCCTCCAGTATGTCAATTCAACCAGCAATCCAGTGGCAACAATTCTACCAACCGTTTCAGTCATTGATTATAAGCCTGCACCCAGGGTAGCATACTTTTCATCCAGAGGACCTTCAATCCTTTCAAGCAATGTTCTCAAGCCTGATATTGCAGCACCAGGAGTTAACATTATTGCTGCATGGATTGGCAATGACACACAAGATGTTCCAAGAGGAAAAAAGCCCTCGGAATACAACATCATCTCAGGGACTTCCATGGCATGCCCACATGTTTCAGGCTTAGCAGGCAGCATCAAATCTAGGAACCCCACTTGGAGTGCCTCTGCTATTAGATCGGCCATCGTGACATCTGCAACTCAAATCAACAATTTGAAGGCTCCCATTACAACGGATTCAGGGTCAGTAGCCACACCTTATGACTATGGAGCAGGGGAAATCACAACATCTGAACCATTGCAACCAGGGCTAGTTTACGAAACCAGTACCATTGACTACTTGAATTACTTATGTTACATTGGACTCAATATAACCACGATTAAGGTCATCTCCAGAACTGTCCCTGATAGTTTCAGTTGCCCCAAGGATTTGAGTCCTGATCATATTTCCGACATCAACTACCCTTCCCTTGCAATCTCCAACTTCAGTGGGAAAGGAGCAGTGAACGTGAGTAGAATTGTTACTAACGTTGGTGAAGAGGATGAAACAGTTTACTCTCCCATTGTCAATGCTCCCAATGGGGTAAATGTCCAATTAATTCCTGATAAACTTCAATTTACTAAAAGTAGTAAAAAGCTAAGCTACCAAATTATTTTCTCTCTGACTTCGACCCCATTGAAGGAAGATGTGTTTGGATCCATTGCTTGGAGTAATGGTAAATATATTGTTCGAAGTCCTTTTGTATTAGCTATATAG 2298 0.4626 MKGNSVPLLLFYSLFLFLGEIIEAGNGISDDTNRNEDGVYIVYMGAADSTNASLRRDHAHVLDLVLRRNEKALVRNYRHGFSGFAARLSKKEASLIAMEPGVVSVFPDPILKLHTTRSWDFLYHQTHVKINAVSNFSSSSDVVIGIIDTGIWPEAASFLDKGMGPVPSRWKGTCMKSQDFNSSNCNRKLIGARYYPGPFGADTARDTIGHGTHVASTAVGATVTDASYYGLAAGTAKGGSTESRLAVYRVCSNIGCPGSAILAAFDDAIADGVDVLSLSLGSSSRLLPDLKSDPIAIGAFHAVERGIVVVCSAGNEGPTPNTVVNDAPWILTVAATTIDRDFQSNVVLGSNKVIKGEAINFSPLSSSPDYPLIYGESAKASSAGLVEARRCHPNSLDGSKVKGKIVICNGKDDDEYPTSLIVDTVKNVGGLGVVHITDRNGAVVSKYGEFPATVVSSKDAPTILQYVNSTSNPVATILPTVSVIDYKPAPRVAYFSSRGPSILSSNVLKPDIAAPGVNIIAAWIGNDTQDVPRGKKPSEYNIISGTSMACPHVSGLAGSIKSRNPTWSASAIRSAIVTSATQINNLKAPITTDSGSVATPYDYGAGEITTSEPLQPGLVYETSTIDYLNYLCYIGLNITTIKVISRTVPDSFSCPKDLSPDHISDINYPSLAISNFSGKGAVNVSRIVTNVGEEDETVYSPIVNAPNGVNVQLIPDKLQFTKSSKKLSYQIIFSLTSTPLKEDVFGSIAWSNGKYIVRSPFVLAI* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02487 765 Gene3D - 339 484 - -
Rops10g02487 765 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Rops10g02487 765 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Rops10g02487 765 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Rops10g02487 765 ProSitePatterns Serine proteases, subtilase family, histidine active site. 210 220 IPR022398 -
Rops10g02487 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Rops10g02487 765 Gene3D Peptidase S8/S53 domain 141 627 IPR036852 GO:0004252|GO:0006508
Rops10g02487 765 FunFam subtilisin-like protease SBT1.5 339 484 - -
Rops10g02487 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 762 IPR045051 -
Rops10g02487 765 Pfam Peptidase inhibitor I9 39 114 IPR010259 -
Rops10g02487 765 Pfam Subtilase family 139 606 IPR000209 GO:0006508|GO:0008236
Rops10g02487 765 Pfam Fibronectin type-III domain 665 762 IPR041469 -
Rops10g02487 765 ProSiteProfiles Serine proteases, subtilase domain profile. 118 614 - -
Rops10g02487 765 CDD PA_subtilisin_like 345 477 - -
Rops10g02487 765 Gene3D - 631 764 - -
Rops10g02487 765 FunFam Subtilisin-like protease SBT1.5 141 355 - -
Rops10g02487 765 SUPERFAMILY Subtilisin-like 120 609 IPR036852 GO:0004252|GO:0006508
Rops10g02487 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 114 IPR037045 -
Rops10g02487 765 CDD Peptidases_S8_3 111 581 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02487 Rops-Chr10 43429689 43443267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02487 35 763 Subtilisin-like Serine Gene Family AT1G20150 52.400 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02487 K25898 - gmx:100820194 1163.29