Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02483 ATGGCTCTGTTTATGAAGCTCCCTAGTGCTTCTTCAACTAGCTTAATGCTCCGTTTTATAGTATTGTTAGTTCTATCATATAGAACGAAGGCTTTGGTGAAACTACCACCAAATGTTACAGTTCCTGCAGTTATAGGTTTCGGAGATTCCATTGTGGACCCAGGCAACAACAACAAGATTAAAACACTCGTCAAGTGCGATTTCCCTCCTTATGGTAAAGATTTTGAGGGAGGGATTCCAACTGGTCGATTTTGCAATGGAAAAATTCCATCAGACCTGCTAGTGGAAGAATTGGGCATTAAAGAGCTTTTACCAGCTTATTTGGATCCAAATCTAAAACCAAGCGACCTGCTAACTGGAGTCTGCTTTGCTTCTGGTGCTTCCGGATACGACCCTTTAACGCCAAAAATAGCGTCAGTGATATCATTGTCCGAACAACTAGACATGTTCAAAGAGTACATAGGGAAGCTTAAAAACATTGTTGGAGAGGACAGAACAAACTTCATCCTGGCCAACAGTCTTTTCATTGTGGTAGCAGGAAGTGACGACATTGCAAACACCTATTTTATTGCTCGCGTGAGACAGTTACAGTATGATGTTCCTGCTTACACCGACCTCATGGTCAACTCAGCCTCTAATTTCGTAAAGGAATTATATAAACTCGGAGCACGCAGAATTGGAGTACTGAGTGCACCACCTATTGGGTGTGTGCCATCACAGAGGACTCTGGCTGGAGGCATACAAAGAGAGTGCTCAGATAAATACAATGAAGCAGCGAAGTTATTCAACTCCAAACTGTCAAAGGAACTGGACTCCCTTAACAATAACTCGCCCAATAGTAGGATCGTTTACATTGATGTCTACAACTCCCTGCTTGATATCATTGTGAACTACCAAAAATATGGCTATAAAGTTGTGGATAGAGGTTGTTGTGGGACAGGTAAGCTAGAGGTGGCAGTGCTATGCAACCCTTTGGACGCCACTTGTCCCAATCCTTCGGAATATGTCTTTTGGGATAGTTATCATCCTACAGAAGCAGTATACAGAAAGATCATAGGCCAAGTCCTTCAAAAATATGTGAATCGATTGTTTTGA 1095 0.4219 MALFMKLPSASSTSLMLRFIVLLVLSYRTKALVKLPPNVTVPAVIGFGDSIVDPGNNNKIKTLVKCDFPPYGKDFEGGIPTGRFCNGKIPSDLLVEELGIKELLPAYLDPNLKPSDLLTGVCFASGASGYDPLTPKIASVISLSEQLDMFKEYIGKLKNIVGEDRTNFILANSLFIVVAGSDDIANTYFIARVRQLQYDVPAYTDLMVNSASNFVKELYKLGARRIGVLSAPPIGCVPSQRTLAGGIQRECSDKYNEAAKLFNSKLSKELDSLNNNSPNSRIVYIDVYNSLLDIIVNYQKYGYKVVDRGCCGTGKLEVAVLCNPLDATCPNPSEYVFWDSYHPTEAVYRKIIGQVLQKYVNRLF* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02483 364 CDD SGNH_plant_lipase_like 42 359 IPR035669 -
Rops10g02483 364 Gene3D SGNH hydrolase 34 361 IPR036514 -
Rops10g02483 364 Pfam GDSL-like Lipase/Acylhydrolase 46 351 IPR001087 GO:0016788
Rops10g02483 364 PANTHER GDSL ESTERASE/LIPASE EXL3 23 354 - -
Rops10g02483 364 FunFam GDSL esterase/lipase APG 33 360 - -
Rops10g02483 364 SUPERFAMILY SGNH hydrolase 173 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02483 Rops-Chr10 43385934 43390666 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02483 38 363 Pollen Coat Proteome AT1G75910 39.818 4.11e-79 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02483 - - gmx:100793078 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g02483 10 43385934 43390666 Rops10g02483 10 43385934 43390666 ECH
Rops9g02582 9 48341858 48345605 Rops10g02483 10 43385934 43390666 PCT