Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02482 ATGGATACGGGCAACAATAACAACAACATGAAAACACTTGCTAGGTGCAATTTCCCTCCATATGGGGTAGATTTCAAGGGTGGCATCCCAACTGGTCGATTTAGCAATGGAAAGGTTCCATCAGACTTTATAGTTGACGAATTGGGCATTAAGGAACTTCTGCCAGCATATTTGGATCCAAATATCCAACCTAGCGATCTCATCACTGGTGTTTGCTTTGCATCCGGTGGTGCCGGGTATGATCCTCTCACATCCAAATTAGCGTCAGCCATATCATTGTCCGGTCAAATAGATTTATTCAACGAATACATAGGGAAGCTCAAAGGGCTTGTGGGAGAGGACAGAACAAACTTCATCCTAGCCAATAGTGTTTTTCTTGTGGTATTAGGTAGCAATGACATTTCCAACACATACTTCTTGTCTCATGCTAGACAAGTGCAATATGATGTTCCCACTTACGCTGACCTAATGGTCAGTTCAGCTTCAAATTTTTTAAAGGAAATATATCAACTGGGTGCAAGGAGGATAGGAGTATTCAGTGCTCCTCCAATTGGGTGTGTGCCATTTCAGAGAACACTGCTTGGAGGAATGGAGAGAAAATGTGCAGAAAAATACAACGACATGGCCAAGTTATTTAACAGCAAACTGTCAAAGGAGCTGGCTTCCCTTAACCAGGACTTGCCCAGCTCCAGGGTGATTTACCTTGATGTTTACAATCCTCTACTTGACATCATTGTAAATTACCAAAATTATGGCTACAAAATCGGAGACAAAGGATGCTGTGGCACAGGCGAAATAGAGGCCGCAGAGTTCTGCAACCCTTTGACTCCACGGTGTCCCGATGTTAGGGACCACGTTTTCTGGGATAGTTTTCATCCCTCGGAAAGTGTTTACAAAAAGCTTGTAGGTCCTTTTCTTCGAAAATATTTGCACCAGTTCTTCTGA 945 0.4307 MDTGNNNNNMKTLARCNFPPYGVDFKGGIPTGRFSNGKVPSDFIVDELGIKELLPAYLDPNIQPSDLITGVCFASGGAGYDPLTSKLASAISLSGQIDLFNEYIGKLKGLVGEDRTNFILANSVFLVVLGSNDISNTYFLSHARQVQYDVPTYADLMVSSASNFLKEIYQLGARRIGVFSAPPIGCVPFQRTLLGGMERKCAEKYNDMAKLFNSKLSKELASLNQDLPSSRVIYLDVYNPLLDIIVNYQNYGYKIGDKGCCGTGEIEAAEFCNPLTPRCPDVRDHVFWDSFHPSESVYKKLVGPFLRKYLHQFF* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02482 314 CDD SGNH_plant_lipase_like 2 309 IPR035669 -
Rops10g02482 314 Pfam GDSL-like Lipase/Acylhydrolase 2 301 IPR001087 GO:0016788
Rops10g02482 314 FunFam GDSL esterase/lipase APG 1 310 - -
Rops10g02482 314 SUPERFAMILY SGNH hydrolase 123 304 - -
Rops10g02482 314 Gene3D SGNH hydrolase 1 308 IPR036514 -
Rops10g02482 314 PANTHER GDSL ESTERASE/LIPASE EXL3 1 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02482 Rops-Chr10 43361413 43364529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02482 1 301 Pollen Coat Proteome AT1G75910 39.474 5.46e-67 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02482 - - gmx:100793604 553.518