Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g02480 ATGAGAAGGATCAATGGTGTGATCTCTGTGGCCAGAGCCTTAAGGGGCTACTCCACCGCCGTCGGCACCCTTCACCGACCACCGCGAGTGGCTCCCCATGGCACATGCTTGAGTTCTAACCCTCAGAATCTTGTTGATCGCAGCATCACAGGGTTTCGTTATTATAGTTCTGCTGCTGCTGCTGCTGCTACGTCTCTGGCTCAAGACCTTCAAACGAAGCCTTCACAAACGGGCTTCAAACCCAAAGAAGTTGTTCTCTTTCAGTACGAGGCTTGTCCATTCTGCAACAAGGTTAAAGCTTTCCTGGATTATCATGATCTTCCGTACAAAATAGTGGAAGTAAATCCGATCAACAAGAAGGAGATCAAATGGTCTGACTACAAGAAAGTGCCTATTTTGACAGTTGATGGTGAACAAATGGTTGATTCTTCAGACATAATTGATAAGTTGATCAAAAGGGTACATCCAGATTATGACCTAAATGCAGAGGAAGAGAAGAAGTGGCGTGAGTGGGTGGACAATCACTTGGTGCATGTTTTGTCACCAAACATATATCGATCTGTTTCTGAGGCACTTGAATCATTTGAATATATCACCACTCAAGGCAATTTCAGTTTCTCTGAGAGGTTAGTGGCAAAGTATGGTGGGGCTGCAGCCATGTATTTCGTGTCAAAGAAATTGAAGAAGAAACACAATATCACTGATGAGCGTGAAGCATTGTATGGAGCTTCCGAACAATGGATCGAGGCTTTGAAGGGCCGAAAATTTCTTGGTGGATTGGATCCTAATTTAGCAGACCTAGCTGTCTTTGGTGTTCTAAGACCCATCCGCCACCTGAAGTCAGGTAGAGATATGGTAGAGCACACGCGAATTGGGAAATGGTACTCTGAGATGGAAGATGCAGTAGGACCGTCTTCCATGGTGTGTGAGCATAGGTAA 939 0.4515 MRRINGVISVARALRGYSTAVGTLHRPPRVAPHGTCLSSNPQNLVDRSITGFRYYSSAAAAAATSLAQDLQTKPSQTGFKPKEVVLFQYEACPFCNKVKAFLDYHDLPYKIVEVNPINKKEIKWSDYKKVPILTVDGEQMVDSSDIIDKLIKRVHPDYDLNAEEEKKWREWVDNHLVHVLSPNIYRSVSEALESFEYITTQGNFSFSERLVAKYGGAAAMYFVSKKLKKKHNITDEREALYGASEQWIEALKGRKFLGGLDPNLADLAVFGVLRPIRHLKSGRDMVEHTRIGKWYSEMEDAVGPSSMVCEHR* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g02480 312 SFLD Prostaglandin E synthase like 58 307 - -
Rops10g02480 312 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 82 159 IPR004045 -
Rops10g02480 312 Gene3D - 160 307 - -
Rops10g02480 312 Gene3D Glutaredoxin 74 155 - -
Rops10g02480 312 PANTHER MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 40 307 - -
Rops10g02480 312 ProSitePatterns Glutaredoxin active site. 86 102 IPR011767 -
Rops10g02480 312 CDD GST_C_mPGES2 158 304 IPR034335 -
Rops10g02480 312 ProSiteProfiles Glutaredoxin domain profile. 72 171 - -
Rops10g02480 312 SFLD Prostaglandin E synthase like.1 58 307 IPR034334 GO:0050220
Rops10g02480 312 SUPERFAMILY Thioredoxin-like 83 176 IPR036249 -
Rops10g02480 312 Pfam Glutathione S-transferase, N-terminal domain 86 153 IPR004045 -
Rops10g02480 312 SUPERFAMILY GST C-terminal domain-like 152 304 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g02480 Rops-Chr10 43335730 43338433 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g02480 92 166 Glutathione S-transferase Gene Family AT5G16710 35.065 6.09e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g02480 K05309 - gmx:100804696 479.559